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Saudi Moumouvirus, the First Group B Mimivirus Isolated from Asia

Authors :
Priscilla Jardot
Didier Raoult
Bernard La Scola
Felipe L. Assis
Jônatas Santos Abrahão
Esam I. Azhar
Catherine Robert
Leena H. Bajrai
Department of Biochemistry [Jeddah, Saudi Arabia] (Faculty of Science)
King Abdulaziz University
Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE)
Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR48
Institut des sciences biologiques (INSB-CNRS)-Institut des sciences biologiques (INSB-CNRS)-Centre National de la Recherche Scientifique (CNRS)
Laboratório de Vírus
Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG)-Instituto de Ciências Biológicas [Goiânia, Brésil] (ICB)
Special Infectious Agents Unit [Jeddah, Saudi Arabia]
King Abdulaziz University-King Fahd Medical Research Center
LB is supported by a scholarship from King Abdulaziz University, Ministry of Education, through the Saudi Arabia Cultural Bureau in France.
INSB-INSB-Centre National de la Recherche Scientifique (CNRS)
Source :
Frontiers in Microbiology, Frontiers in Microbiology, 2016, 7, pp.2029. ⟨10.3389/fmicb.2016.02029⟩, Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.2029. ⟨10.3389/fmicb.2016.02029⟩, Frontiers in Microbiology, Vol 7 (2016)
Publication Year :
2016
Publisher :
HAL CCSD, 2016.

Abstract

International audience; The number of novel giant viruses identified and characterized from the recently proposed order Megavirales has increased in recent years and new questions have been raised regarding viral diversity and evolution. Here, we describe the isolation and characterization of Saudi moumouvirus (SDMV), a new giant virus belonging to Mimivirus lineage B, isolated from a sewage sample taken from the King Abdulaziz University hospital in Jeddah, Saudi Arabia. SDMV presented 500 nm icosahedral particles with a 1,046,087 bp genome, which is larger than moumouvirus-like genomes which have been described in the past. The SDMV genome was predicted to encode 868 ORFs, ranging in size from 54 to 2,914 amino acids, with a mean size of 349 aa. Furthermore, this genome was predicted to encode 40 new genes (ORFans) without similarity with other sequences (ORFan L850 transcript was detected by qPCR in infected amoeba), in addition to 42 hypothetical proteins (pseudo-ORFs) with less than 100 aa, which matched other sequences in the NCBI nr database. Phylogenetic analysis showed that SDMV clustered together with mimiviruses from lineage B, including moumouvirus-like strains. It is, therefore, the third Mimivirus to be isolated in Asia and the first of group B.

Details

Language :
English
ISSN :
1664302X
Database :
OpenAIRE
Journal :
Frontiers in Microbiology, Frontiers in Microbiology, 2016, 7, pp.2029. ⟨10.3389/fmicb.2016.02029⟩, Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.2029. ⟨10.3389/fmicb.2016.02029⟩, Frontiers in Microbiology, Vol 7 (2016)
Accession number :
edsair.doi.dedup.....3061122cbe6559b21734bddf33b62e2c
Full Text :
https://doi.org/10.3389/fmicb.2016.02029⟩