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A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1
- Source :
- Nature Genetics, 42, 11, pp. 985-90, Nature Genetics, 42, 985-90
- Publication Year :
- 2010
-
Abstract
- Contains fulltext : 89179.pdf (Publisher’s version ) (Closed access) To identify new susceptibility loci for psoriasis, we undertook a genome-wide association study of 594,224 SNPs in 2,622 individuals with psoriasis and 5,667 controls. We identified associations at eight previously unreported genomic loci. Seven loci harbored genes with recognized immune functions (IL28RA, REL, IFIH1, ERAP1, TRAF3IP2, NFKBIA and TYK2). These associations were replicated in 9,079 European samples (six loci with a combined P < 5 x 10 and two loci with a combined P < 5 x 10). We also report compelling evidence for an interaction between the HLA-C and ERAP1 loci (combined P = 6.95 x 10). ERAP1 plays an important role in MHC class I peptide processing. ERAP1 variants only influenced psoriasis susceptibility in individuals carrying the HLA-C risk allele. Our findings implicate pathways that integrate epidermal barrier dysfunction with innate and adaptive immune dysregulation in psoriasis pathogenesis. 01 november 2010
- Subjects :
- Genome-wide association study
Single-nucleotide polymorphism
HLA-C Antigens
Biology
medicine.disease_cause
Aminopeptidases
Polymorphism, Single Nucleotide
Risk Assessment
Chromosomes
Article
Major Histocompatibility Complex
Minor Histocompatibility Antigens
03 medical and health sciences
HLA-C
0302 clinical medicine
Gene interaction
Reference Values
Psoriasis
Chromosome Mapping
Chromosomes, Human
Genetic Variation
Humans
Europe
Genome-Wide Association Study
Genetic Predisposition to Disease
Chromosomes, Human, X
Genetics
medicine
Polymorphism
030304 developmental biology
Genetic association
0303 health sciences
NFKBIA Gene
Single Nucleotide
Immune dysregulation
medicine.disease
3. Good health
Settore MED/03 - Genetica Medica
030220 oncology & carcinogenesis
Infection and autoimmunity [NCMLS 1]
Human
Subjects
Details
- ISSN :
- 10614036
- Database :
- OpenAIRE
- Journal :
- Nature Genetics, 42, 11, pp. 985-90, Nature Genetics, 42, 985-90
- Accession number :
- edsair.doi.dedup.....3003387cb8371d7f2ab43d2125f92651
- Full Text :
- https://doi.org/10.1038/ng.694