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Supplementary Figures 1-10 from Whole-exome Sequencing of Nigerian Prostate Tumors from the Prostate Cancer Transatlantic Consortium (CaPTC) Reveals DNA Repair Genes Associated with African Ancestry

Authors :
Clayton Yates
Damali N. Martin
Folake T. Odedina
Windy Dean-Colomb
Solomon O. Rotimi
Kathryn R. Brignole
Moray J. Campbell
Paz Polak
Melissa Davis
Wei Tang
Stefan Ambs
Isra Elhussin
Balasubramanyam Karanam
Olabode P. Oluwole
Omolara A. Fatiregun
Ademola Popoola
Faruk Mohammed
Chidiebere N. Ogo
John O. Obafunwa
Paul Jibrin
Kayode A. Adeniji
Ernest T. Kaninjing
Jason A. White
Publication Year :
2023
Publisher :
American Association for Cancer Research (AACR), 2023.

Abstract

Supplementary Figure 1. WES Analysis Workflow. Supplementary Figure 2. Variant Strand Bias. Supplementary Figure 3. Somatic Variant Filtering. Supplementary Figure 4. Manual Somatic Variant Inspection. Supplementary Figure 5. Genetic Admixture Analysis. Supplementary Figure 6. Comparison of somatic variant count based on normal sample usage. Supplementary Figure 7. TCGA EA Somatic Variant Lollipop Plots. Supplementary Figure 8. NG PCa Novel Somatic Variants. Supplementary Figure 9. Nigerian Germline Variant – Normal/Tumor Comparison Lollipop Plots. Supplementary Figure 10. TCGA PCa Somatic Variant COSMIC Signature Analysis.

Details

Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....2f5320bae4199470d7371b0ef2504447
Full Text :
https://doi.org/10.1158/2767-9764.22545513.v1