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SIZE DISTRIBUTION OF AMYLOID FIBRILS. MATHEMATICAL MODELS AND EXPERIMENTAL DATA

Authors :
Harvey Thomas Banks
Marie Doumic
Hadjer Wafaa Haffaf
Marc Hoffmann
Human Rezaei
Stéphanie Prigent
Laboratoire Jacques-Louis Lions (LJLL)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS)
Modelling and Analysis for Medical and Biological Applications (MAMBA)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS)-Inria Paris-Rocquencourt
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
Center for Research in Scientific Computation [Raleigh] (CRSC)
North Carolina State University [Raleigh] (NC State)
University of North Carolina System (UNC)-University of North Carolina System (UNC)
CEntre de REcherches en MAthématiques de la DEcision (CEREMADE)
Université Paris Dauphine-PSL-Centre National de la Recherche Scientifique (CNRS)
Unité de recherche Virologie et Immunologie Moléculaires (VIM)
Institut National de la Recherche Agronomique (INRA)
Université Paris Dauphine-PSL
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
Unité de recherche Virologie et Immunologie Moléculaires (VIM (UR 0892))
Centre National de la Recherche Scientifique (CNRS)-Université Paris Dauphine-PSL
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)
Source :
International Journal of Pure and Applied Mathematics, International Journal of Pure and Applied Mathematics, Academic Publishing Ltd, 2014, 93 (6), pp.845-878. ⟨10.12732/ijpam.v93i6.10⟩, International Journal of Pure and Apllied Mathematics, International Journal of Pure and Applied Mathematics, 2014, 93 (6), pp.845-878. ⟨10.12732/ijpam.v93i6.10⟩
Publication Year :
2014
Publisher :
Academic Publications, 2014.

Abstract

International audience; More than twenty types of proteins can adopt misfolded conformations, which can co-aggregate into amyloid fibrils, and are related to pathologies such as Alzheimer's disease. This article surveys mathematical models for aggregation chain reactions, and discuss the ability to use them to understand amyloid distributions. Numerous reactions have been proposed to play a role in their aggregation kinetics, though the relative importance of each reaction in vivo is unclear: these include activation steps, with nucleation compared to initiation, disaggregation steps, with depolymerization compared to fragmentation, and additional processes such as filament coalescence or secondary nucleation. We have statistically analysed the shape of the size distribution of prion fibrils, with the specific example of truncated data due to the experimental technique (electron microscopy). A model of polymerization and depolymerization succeeds in explaining this distribution. It is a very plausible scheme though, as evidenced in the review of other mathematical models, other types of reactions could also give rise to the same type of distributions.

Details

ISSN :
13143395 and 13118080
Volume :
93
Database :
OpenAIRE
Journal :
International Journal of Pure and Apllied Mathematics
Accession number :
edsair.doi.dedup.....2f48ebccdb32faff20a80f65f4d207aa
Full Text :
https://doi.org/10.12732/ijpam.v93i6.10