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Synthesis by deamination reaction and crystal structure at 120 K of (16Z,19E)-18-oxo-N-(pyridin-2-yl)-6,7,9,10-tetrahydro-18H-dibenzo[h,o][1,4,7]trioxacyclohexadecine-17-carboxamide
- Source :
- Acta Crystallographica Section E: Crystallographic Communications, Acta Crystallographica Section E: Crystallographic Communications, Vol 76, Iss 9, Pp 1454-1457 (2020)
- Publication Year :
- 2020
- Publisher :
- International Union of Crystallography, 2020.
-
Abstract
- The new title aza-crown ether has been synthesized by a deamination reaction and its crystal structure has been determined at 120 K. The title mol­ecule contains a 16-membered macrocycle with the conformation of the C—O—C—C—O—C—C—O—C polyether chain being t–g (-)–t–t–g (+)–t (t = trans, 180°; g = gauche, ±60°).<br />The title compound, C27H24N2O5, is a product of the deamination reaction from aza-14-crown-4 ether containing the γ-piperidone subunit. The title mol­ecule contains a 16-membered macrocycle with the conformation of the C—O—C—C—O—C—C—O—C polyether chain being t–g (-)–t–t–g (+)–t (t = trans, 180°; g = gauche, ±60°). The dihedral angle between the planes of the benzene rings fused to the aza-14-crown-4-ether moiety is 31.11 (14)°. The cavity size inside the macrocycle is 4.72 Å. The macrocycle is significantly flattened as a result of the extended conjugated system. Steric repulsion between the pyridyl­carboxamide fragment and the benzene ring results in a slight deviation of macrocycle from planarity. The structure also features intra­molecular hydrogen bonding, which results in a deviation of the angle between the planes of amide and pyridyl groups from planarity: this angle is 16.32 (18)°. In the crystal, the mol­ecules are linked into infinite zigzag chains via inter­molecular C—H⋯π contacts. The chains are bound into layers parallel to (100) by weak inter­molecular C—H⋯O hydrogen bonds.
- Subjects :
- crystal structure
medicine.drug_class
Carboxamide
Ether
Crystal structure
Dihedral angle
dibenzo-16-crown-3
Ring (chemistry)
Research Communications
C—H⋯π contacts
chemistry.chemical_compound
Amide
medicine
deamination reaction
Moiety
General Materials Science
aza-crown ether
Crystallography
c—h...π contacts
Chemistry
Hydrogen bond
General Chemistry
Condensed Matter Physics
QD901-999
hydrogen bonds
γ-piperidone
Subjects
Details
- Language :
- English
- ISSN :
- 20569890
- Volume :
- 76
- Issue :
- Pt 9
- Database :
- OpenAIRE
- Journal :
- Acta Crystallographica Section E: Crystallographic Communications
- Accession number :
- edsair.doi.dedup.....2f003514dca435ac180f6641ee5bcc37