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The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

Authors :
Jüri Parik
Ene Metspalu
Susanne Nordenfelt
Gabriel Renaud
Andres Ruiz-Linares
Qiaomei Fu
Joseph Wee
Oleg Balanovsky
Hovhannes Sahakyan
Olga L. Posukh
Niru Chennagiri
George Ayodo
Doron M. Behar
Cheryl A. Winkler
Stanislav Dryomov
Iain Mathieson
Aashish R. Jha
Cynthia M. Beall
Iosif Lazaridis
Sarah A. Tishkoff
Draga Toncheva
Richard Villems
Damian Labuda
M. Syafiq Abdullah
Giovanni Poletti
Toomas Kivisild
Rem I. Sukernik
Yaniv Erlich
William Klitz
Anna Di Rienzo
Tor Hervig
Elena B. Starikovskaya
Levon Yepiskoposyan
Nick Patterson
David Comas
Jeffrey P. Spence
George Stamatoyannopoulos
Francois Balloux
Yun S. Song
David Reich
Cristian Capelli
Mark Lipson
Kumarasamy Thangaraj
Sergey Litvinov
Janet Kelso
Brenna M. Henn
Pontus Skoglund
Ugur Hodoglugil
Arti Tandon
Andrés Moreno-Estrada
Sriram Sankararaman
Carla Gallo
Elza Khusnutdinova
Lynn B. Jorde
Chris Tyler-Smith
Robert W. Mahley
Nadin Rohland
Elena Balanovska
Swapan Mallick
Choongwon Jeong
Antti Sajantila
Peter de Knijff
Mengyao Zhao
Michael J. Bamshad
Rita Khusainova
Thomas Willems
Sena Karachanak-Yankova
Heng Li
Irene Gallego Romero
Lalji Singh
Michael F. Hammer
W. Scott Watkins
Fernando Racimo
Svante Pääbo
George van Driem
Melissa Gymrek
Yali Xue
Mait Metspalu
Claudio M. Bravi
Source :
Recercat. Dipósit de la Recerca de Catalunya, instname, Nature, Nature, vol 538, iss 7624, SEDICI (UNLP), Universidad Nacional de La Plata, instacron:UNLP, Nature, 538(7624), 201, Mallick, Swapan; Li, Heng; Lipson, Mark; Mathieson, Iain; Gymrek, Melissa; Racimo, Fernando; et al.(2016). The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.. Nature, 538(7624), 201-206. doi: 10.1038/nature18964. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/71x1v1d2
Publication Year :
2016

Abstract

Here we report the Simons Genome Diversity Project data set: high quality genomes from 300 individuals from 142 diverse populations. These genomes include at least 5.8 million base pairs that are not present in the human reference genome. Our analysis reveals key features of the landscape of human genome variation, including that the rate of accumulation of mutations has accelerated by about 5% in non-Africans compared to Africans since divergence. We show that the ancestors of some pairs of present-day human populations were substantially separated by 100,000 years ago, well before the archaeologically attested onset of behavioural modernity. We also demonstrate that indigenous Australians, New Guineans and Andamanese do not derive substantial ancestry from an early dispersal of modern humans; instead, their modern human ancestry is consistent with coming from the same source as that of other non-Africans.<br />Facultad de Ciencias Naturales y Museo

Details

Language :
English
Database :
OpenAIRE
Journal :
Recercat. Dipósit de la Recerca de Catalunya, instname, Nature, Nature, vol 538, iss 7624, SEDICI (UNLP), Universidad Nacional de La Plata, instacron:UNLP, Nature, 538(7624), 201, Mallick, Swapan; Li, Heng; Lipson, Mark; Mathieson, Iain; Gymrek, Melissa; Racimo, Fernando; et al.(2016). The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.. Nature, 538(7624), 201-206. doi: 10.1038/nature18964. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/71x1v1d2
Accession number :
edsair.doi.dedup.....2d411cd6f6f44c0c1bb40fba811703cc