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Determination of mean and Gaussian curvatures of highly curved asymmetric lipid bilayers: the case study of the influence of cholesterol on the membrane shape

Authors :
Christophe Ramseyer
Semen O. Yesylevskyy
Laboratoire Chrono-environnement - CNRS - UBFC (UMR 6249) (LCE)
Centre National de la Recherche Scientifique (CNRS)-Université de Franche-Comté (UFC)
Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC)
Laboratoire Chrono-environnement ( LCE )
Université Bourgogne Franche-Comté ( UBFC ) -Centre National de la Recherche Scientifique ( CNRS ) -Université de Franche-Comté ( UFC )
Source :
Physical Chemistry Chemical Physics, Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2014, 16 (32), pp.17052-17061. ⟨10.1039/c4cp01544d⟩, Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2014, 16 (32), pp.17052-17061. 〈10.1039/c4cp01544d〉
Publication Year :
2014
Publisher :
HAL CCSD, 2014.

Abstract

Although molecular dynamics simulations of highly curved lipid bilayers have become increasingly popular in recent years, there is no simple and general method of computing the shape and curvature of the bilayer, which is bent arbitrarily in three dimensions. In this work we propose a method, which allows computing local normal, mean and Gaussian curvatures at any point of an arbitrarily curved lipid membrane using molecular dynamics trajectories. The method is based on the analysis of local membrane patches and is applicable to the membranes of any shape and topology – bilayers, vesicles, micelles, bicelles, etc. The method is applied to a highly curved asymmetric DOPC/DOPS lipid bilayer simulated by means of extended coarse-grained molecular dynamics simulations. It is shown that addition of cholesterol makes the membrane more topologically heterogeneous by increasing the content of highly curved regions with either saddle-like or sphere-like topology. The topology of the DOPS lipid domains is more sensitive to the addition of cholesterol than DOPC domains.

Details

Language :
English
ISSN :
14639076 and 14639084
Database :
OpenAIRE
Journal :
Physical Chemistry Chemical Physics, Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2014, 16 (32), pp.17052-17061. ⟨10.1039/c4cp01544d⟩, Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2014, 16 (32), pp.17052-17061. 〈10.1039/c4cp01544d〉
Accession number :
edsair.doi.dedup.....2bed4d0d0701a3bf6be74a3774c43c23
Full Text :
https://doi.org/10.1039/c4cp01544d⟩