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Identification of eight novel SDHB, SDHC, SDHD germline variants in Danish pheochromocytoma/paraganglioma patients

Authors :
Åse Krogh Rasmussen
Maria Rossing
Finn Cilius Nielsen
Marc Bennedbæk
Anne-Marie Gerdes
Thomas Hansen
Anne-Bine Skytte
Uffe Birk Jensen
Source :
Hereditary Cancer in Clinical Practice, Bennedbæk, M, Rossing, M, Rasmussen, Å K, Gerdes, A-M, Skytte, A-B, Jensen, U B, Nielsen, F C & Hansen, T V O 2016, ' Identification of eight novel SDHB, SDHC, SDHD germline variants in Danish pheochromocytoma/paraganglioma patients ', Familial Cancer, vol. 14, no. 13, pp. 13 . https://doi.org/10.1186/s13053-016-0053-6
Publication Year :
2016

Abstract

BACKGROUND: Germline mutations in the succinate dehydrogenase complex genes SDHB, SDHC, and SDHD predispose to pheochromocytomas and paragangliomas. Here, we examine the SDHB, SDHC, and SDHD mutation spectrum in the Danish population by screening of 143 Danish pheochromocytoma and paraganglioma patients.METHODS: Mutational screening was performed by Sanger sequencing or next-generation sequencing. The frequencies of variants of unknown clinical significance, e.g. intronic, missense, and synonymous variants, were determined using the Exome Aggregation Consortium database, while the significance of missense mutations was predicted by in silico and loss of heterozygosity analysis when possible.RESULTS: We report 18 germline variants; nine in SDHB, six in SDHC, and three in SDHD. Of these 18 variants, eight are novel. We classify 12 variants as likely pathogenic/pathogenic, one as likely benign, and five as variants of unknown clinical significance.CONCLUSIONS: Identifying and classifying SDHB, SDHC, and SDHD variants present in the Danish population will augment the growing knowledge on variants in these genes and may support future clinical risk assessments.

Details

ISSN :
17312302
Volume :
14
Database :
OpenAIRE
Journal :
Hereditary cancer in clinical practice
Accession number :
edsair.doi.dedup.....2b7e5cc62bc07547e18fcb67be841ad2