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Identification of eight novel SDHB, SDHC, SDHD germline variants in Danish pheochromocytoma/paraganglioma patients
- Source :
- Hereditary Cancer in Clinical Practice, Bennedbæk, M, Rossing, M, Rasmussen, Å K, Gerdes, A-M, Skytte, A-B, Jensen, U B, Nielsen, F C & Hansen, T V O 2016, ' Identification of eight novel SDHB, SDHC, SDHD germline variants in Danish pheochromocytoma/paraganglioma patients ', Familial Cancer, vol. 14, no. 13, pp. 13 . https://doi.org/10.1186/s13053-016-0053-6
- Publication Year :
- 2016
-
Abstract
- BACKGROUND: Germline mutations in the succinate dehydrogenase complex genes SDHB, SDHC, and SDHD predispose to pheochromocytomas and paragangliomas. Here, we examine the SDHB, SDHC, and SDHD mutation spectrum in the Danish population by screening of 143 Danish pheochromocytoma and paraganglioma patients.METHODS: Mutational screening was performed by Sanger sequencing or next-generation sequencing. The frequencies of variants of unknown clinical significance, e.g. intronic, missense, and synonymous variants, were determined using the Exome Aggregation Consortium database, while the significance of missense mutations was predicted by in silico and loss of heterozygosity analysis when possible.RESULTS: We report 18 germline variants; nine in SDHB, six in SDHC, and three in SDHD. Of these 18 variants, eight are novel. We classify 12 variants as likely pathogenic/pathogenic, one as likely benign, and five as variants of unknown clinical significance.CONCLUSIONS: Identifying and classifying SDHB, SDHC, and SDHD variants present in the Danish population will augment the growing knowledge on variants in these genes and may support future clinical risk assessments.
- Subjects :
- 0301 basic medicine
Germline
SDHB
Pheochromocytoma
Loss of heterozygosity
Paraganglioma
03 medical and health sciences
symbols.namesake
0302 clinical medicine
Germline mutation
Medicine
Missense mutation
Exome
Genetics (clinical)
Sanger sequencing
Genetics
business.industry
Research
medicine.disease
Classification
SDHC
SDHD
030104 developmental biology
Oncology
030220 oncology & carcinogenesis
Mutation
symbols
business
Subjects
Details
- ISSN :
- 17312302
- Volume :
- 14
- Database :
- OpenAIRE
- Journal :
- Hereditary cancer in clinical practice
- Accession number :
- edsair.doi.dedup.....2b7e5cc62bc07547e18fcb67be841ad2