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Adaptation and conservation insights from the koala genome

Authors :
Danielle Madden
Camilla M. Whittington
Rachel J. O’Neill
Simon Y. W. Ho
Zhiliang Chen
Marilyn B. Renfree
Val Attenbrow
Andrew King
Graham J Etherington
Siobhan Dennison
Parice A. Brandies
David E. Alquezar-Planas
Emma Peel
Amber Gillett
Yuanyuan Cheng
Jennifer A. Marshall Graves
Thomas N. Heider
Greta J. Frankham
Donald J. Colgan
Elizabeth A. Jones
Katherine Belov
Carolyn J. Hogg
Janine E. Deakin
Federica Di Palma
Charles Robin
Catherine E. Grueber
Zachary Duda
Denis O’Meally
Alex D. Greenwood
Jason G. Bragg
Takashi Hayakawa
Clare E. Holleley
Amanda Yoon Yee Chong
Ryan Salinas
Matthew Hobbs
Belinda Wright
Will Nash
Arthur Georges
Kyle M. Ewart
Mark D. B. Eldridge
Adam Polkinghorne
Rebecca N. Johnson
Paul D. Waters
Peter Timms
Shafagh A. Waters
Merran Govendir
Katrina M. Morris
Tonia Russell
Kyriakos Tsangaras
Wilfried Haerty
Hardip R. Patel
Linda E. Neaves
Kristofer M. Helgen
Marc R. Wilkins
Source :
Johnson, R N, O'Meally, D, Chen, Z, Etherington, G J, Ho, S Y W, Nash, W J, Grueber, C E, Cheng, Y, Whittington, C M, Dennison, S, Peel, E, Haerty, W, O'Neill, R J, Colgan, D, Russell, T L, Alquezar-Planas, D E, Attenbrow, V, Bragg, J G, Brandies, P A, Chong, A Y-Y, Deakin, J E, Di Palma, F, Duda, Z, Eldridge, M D B, Ewart, K M, Hogg, C J, Frankham, G J, Georges, A, Gillett, A K, Govendir, M, Greenwood, A D, Hayakawa, T, Helgen, K M, Hobbs, M, Holleley, C E, Heider, T N, Jones, E A, King, A, Madden, D, Graves, J A M, Morris, K M, Neaves, L E, Patel, H R, Polkinghorne, A, Renfree, M B, Robin, C, Salinas, R, Tsangaras, K, Waters, P D & Waters, S A 2018, ' Adaptation and conservation insights from the koala genome ', Nature Genetics, vol. 50, no. 8, pp. 1102-1111 . https://doi.org/10.1038/s41588-018-0153-5, Nature Genetics, Nature genetics, 50:1102–1111
Publication Year :
2018

Abstract

The koala, the only extant species of the marsupial family Phascolarctidae, is classified as ‘vulnerable’ due to habitat loss and widespread disease. We sequenced the koala genome, producing a complete and contiguous marsupial reference genome, including centromeres. We reveal that the koala’s ability to detoxify eucalypt foliage may be due to expansions within a cytochrome P450 gene family, and its ability to smell, taste and moderate ingestion of plant secondary metabolites may be due to expansions in the vomeronasal and taste receptors. We characterized novel lactation proteins that protect young in the pouch and annotated immune genes important for response to chlamydial disease. Historical demography showed a substantial population crash coincident with the decline of Australian megafauna, while contemporary populations had biogeographic boundaries and increased inbreeding in populations affected by historic translocations. We identified genetically diverse populations that require habitat corridors and instituting of translocation programs to aid the koala’s survival in the wild.<br />コアラの全ゲノム配列の解読に成功 --コアラはなぜ猛毒のユーカリを食べるのか?--. 京都大学プレスリリース. 2018-07-04.

Details

Language :
English
Database :
OpenAIRE
Journal :
Johnson, R N, O'Meally, D, Chen, Z, Etherington, G J, Ho, S Y W, Nash, W J, Grueber, C E, Cheng, Y, Whittington, C M, Dennison, S, Peel, E, Haerty, W, O'Neill, R J, Colgan, D, Russell, T L, Alquezar-Planas, D E, Attenbrow, V, Bragg, J G, Brandies, P A, Chong, A Y-Y, Deakin, J E, Di Palma, F, Duda, Z, Eldridge, M D B, Ewart, K M, Hogg, C J, Frankham, G J, Georges, A, Gillett, A K, Govendir, M, Greenwood, A D, Hayakawa, T, Helgen, K M, Hobbs, M, Holleley, C E, Heider, T N, Jones, E A, King, A, Madden, D, Graves, J A M, Morris, K M, Neaves, L E, Patel, H R, Polkinghorne, A, Renfree, M B, Robin, C, Salinas, R, Tsangaras, K, Waters, P D & Waters, S A 2018, ' Adaptation and conservation insights from the koala genome ', Nature Genetics, vol. 50, no. 8, pp. 1102-1111 . https://doi.org/10.1038/s41588-018-0153-5, Nature Genetics, Nature genetics, 50:1102–1111
Accession number :
edsair.doi.dedup.....2af100bb35684bb2ad32daceb8df8e97