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Phylogenetic studies of Prunella strophiata (Passeridae: Prunella) based on complete mitochondrial DNA sequences
- Source :
- Mitochondrial DNA. Part B, Resources, article-version (VoR) Version of Record
- Publication Year :
- 2016
- Publisher :
- Informa UK Limited, 2016.
-
Abstract
- Rufous-breasted Accentor (Prunella strophiata) is a small-sized bunting with an extremely geographical range in the world. Here, the complete mitochondrial genome of P. strophiata (16,830 bp in length) has been analyzed for building the database. Similar to the typical mtDNA of vertebrates, it contained 37 genes (13 protein-coding genes, two rRNA genes and 22 tRNA genes) and a non-coding region (D-loop). Overall base composition of the complete mitochondrial DNA is A (30.3%), G (14.7%), C (31.0%) and T (24.0%), the percentage of A and T (54.3%) is higher than G and C (45.7%). All the genes in P. strophiata were distributed on the H-strand, except for the ND6 subunit gene and 9 tRNA genes which were encoded on the L-strand. The phylogenetic relationships of 12 Passeriformes species were reconstructed based on the complete mtDNA sequences using the Bayesian inference method.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Genetics
Mitochondrial DNA
Phylogenetic tree
biology
Ribosomal RNA
biology.organism_classification
Prunella strophiata
010603 evolutionary biology
01 natural sciences
03 medical and health sciences
030104 developmental biology
Accentor
Mitochondrial genome
Transfer RNA
phylogenetic relationships
Prunella
Passeriformes
Molecular Biology
Gene
Mitogenome Announcement
Research Article
Subjects
Details
- ISSN :
- 23802359
- Volume :
- 1
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA Part B
- Accession number :
- edsair.doi.dedup.....2a15c7aa5308a52c666c830889489d21
- Full Text :
- https://doi.org/10.1080/23802359.2016.1181994