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Active transposition in zebrafish
- Source :
- Proceedings of the National Academy of Sciences. 93:10870-10875
- Publication Year :
- 1996
- Publisher :
- Proceedings of the National Academy of Sciences, 1996.
-
Abstract
- We have identified a new family of Tc1-like transposons in the zebrafish, Danio rerio. The sequence of a candidate active transposon, deduced from sample Tzf elements, shows limited resemblance to the previously described Tdr1 elements of zebrafish. Both the Tzf and the Tdr elements are extremely abundant in zebrafish. We describe here a general strategy for detecting transposition events in a complex genome and demonstrate its utility by selectively monitoring hundreds of potentially active Tzf copies in the zebrafish genome against a background of other related elements. We have followed members of a zebrafish pedigree, using this two-dimensional transposon display strategy, to identify the first examples of active transposition of such elements in vertebrates.
- Subjects :
- Transposable element
animal structures
Molecular Sequence Data
Danio
Sequence alignment
Computational biology
medicine.disease_cause
Genome
Transposition (music)
Consensus Sequence
medicine
Consensus sequence
Animals
Electrophoresis, Gel, Two-Dimensional
Amino Acid Sequence
Zebrafish
Genetics
Mutation
Polymorphism, Genetic
Multidisciplinary
Base Sequence
biology
fungi
biology.organism_classification
Pedigree
embryonic structures
DNA Transposable Elements
Sequence Alignment
Research Article
Subjects
Details
- ISSN :
- 10916490 and 00278424
- Volume :
- 93
- Database :
- OpenAIRE
- Journal :
- Proceedings of the National Academy of Sciences
- Accession number :
- edsair.doi.dedup.....2997d812e094549bb6914f41a799e1e4
- Full Text :
- https://doi.org/10.1073/pnas.93.20.10870