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The utility of metabolomics in natural product and biomarker characterization

Authors :
Joonseok Oh
Adam W. Keasling
Mark T. Hamann
Kim L. Colson
Daniel G. Cox
Source :
Biochimica et Biophysica Acta (BBA) - General Subjects. 1840:3460-3474
Publication Year :
2014
Publisher :
Elsevier BV, 2014.

Abstract

Metabolomics is a well-established rapidly developing research field involving quantitative and qualitative metabolite assessment within biological systems. Recent improvements in metabolomics technologies reveal the unequivocal value of metabolomics tools in natural products discovery, gene-function analysis, systems biology and diagnostic platforms.We review here some of the prominent metabolomics methodologies employed in data acquisition and analysis of natural products and disease-related biomarkers.This review demonstrates that metabolomics represents a highly adaptable technology with diverse applications ranging from environmental toxicology to disease diagnosis. Metabolomic analysis is shown to provide a unique snapshot of the functional genetic status of an organism by examining its biochemical profile, with relevance toward resolving phylogenetic associations involving horizontal gene transfer and distinguishing subgroups of genera possessing high genetic homology, as well as an increasing role in both elucidating biosynthetic transformations of natural products and detecting preclinical biomarkers of numerous disease states.This review expands the interest in multiplatform combinatorial metabolomic analysis. The applications reviewed range from phylogenetic assignment, biosynthetic transformations of natural products, and the detection of preclinical biomarkers.

Details

ISSN :
03044165
Volume :
1840
Database :
OpenAIRE
Journal :
Biochimica et Biophysica Acta (BBA) - General Subjects
Accession number :
edsair.doi.dedup.....295a40d7fd84d5d4204b3d6f578f90e5
Full Text :
https://doi.org/10.1016/j.bbagen.2014.08.007