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GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks
- Source :
- Bioinformatics. 29:2505-2506
- Publication Year :
- 2013
- Publisher :
- Oxford University Press (OUP), 2013.
-
Abstract
- Summary: Network-level visualization of functional data is a key aspect of both analysis and understanding of biological systems. In a continuing effort to create clear and integrated visualizations that facilitate the gathering of novel biological insights despite the overwhelming complexity of data, we present here the GrAph LANdscape VisualizaTion (GALANT), a Cytoscape plugin that builds functional landscapes onto biological networks. By using GALANT, it is possible to project any type of numerical data onto a network to create a smoothed data map resembling the network layout. As a Cytoscape plugin, GALANT is further improved by the functionalities of Cytoscape, the popular bioinformatics package for biological network visualization and data integration. Availability: http://www.lbbc.ibb.unesp.br/galant. Contact: esther@ibb.unesp.br Supplementary Information: Supplementary data are available at Bioinformatics online.
- Subjects :
- Statistics and Probability
Lung Neoplasms
Computer science
business.industry
Computational Biology
computer.software_genre
Biochemistry
Computer Science Applications
Data mapping
Visualization
World Wide Web
Computational Mathematics
Software
Gene Expression Regulation
Computational Theory and Mathematics
Graph (abstract data type)
Plug-in
business
Lung
Molecular Biology
computer
Biological network
Signal Transduction
Data integration
Subjects
Details
- ISSN :
- 13674811 and 13674803
- Volume :
- 29
- Database :
- OpenAIRE
- Journal :
- Bioinformatics
- Accession number :
- edsair.doi.dedup.....27c2b1c98d7900cfdfe422497b88687c
- Full Text :
- https://doi.org/10.1093/bioinformatics/btt377