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Michaelis-Menten reaction scheme as a unified approach towards the optimal restart problem
- Source :
- Physical review. E, Statistical, nonlinear, and soft matter physics. 92(6)
- Publication Year :
- 2015
-
Abstract
- We study the effect of restart, and retry, on the mean completion time of a generic process. The need to do so arises in various branches of the sciences and we show that it can naturally be addressed by taking advantage of the classical reaction scheme of Michaelis and Menten. Stopping a process in its midst, only to start it all over again, may prolong, leave unchanged, or even shorten the time taken for its completion. Here we are interested in the optimal restart problem, i.e., in finding a restart rate which brings the mean completion time of a process to a minimum. We derive the governing equation for this problem and show that it is exactly solvable in cases of particular interest. We then continue to discover regimes at which solutions to the problem take on universal, details independent, forms which further give rise to optimal scaling laws. The formalism we develop, and the results obtained, can be utilized when optimizing stochastic search processes and randomized computer algorithms. An immediate connection with kinetic proofreading is also noted and discussed.
- Subjects :
- Mathematical optimization
Statistical Mechanics (cond-mat.stat-mech)
Reaction scheme
FOS: Physical sciences
General Medicine
Governing equation
Michaelis–Menten kinetics
Formalism (philosophy of mathematics)
Biological Physics (physics.bio-ph)
Optimal scaling
Physics - Biological Physics
Completion time
Kinetic proofreading
Condensed Matter - Statistical Mechanics
Mathematics
Subjects
Details
- ISSN :
- 15502376
- Volume :
- 92
- Issue :
- 6
- Database :
- OpenAIRE
- Journal :
- Physical review. E, Statistical, nonlinear, and soft matter physics
- Accession number :
- edsair.doi.dedup.....27920a0d273e38c60884ed66aaf85f07