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Identfication of Potent LXRβ-Selective Agonists without LXRα Activation by In Silico Approaches
- Source :
- Molecules, Volume 23, Issue 6, Molecules, Vol 23, Iss 6, p 1349 (2018), Molecules : A Journal of Synthetic Chemistry and Natural Product Chemistry
- Publication Year :
- 2018
- Publisher :
- Multidisciplinary Digital Publishing Institute, 2018.
-
Abstract
- Activating Liver X receptors (LXRs) represents a promising therapeutic option for dyslipidemia. However, activating LXR&alpha<br />may cause undesired lipogenic effects. Discovery of highly LXR&beta<br />selective agonists without LXR&alpha<br />activation were indispensable for dyslipidemia. In this study, in silico approaches were applied to develop highly potent LXR&beta<br />selective agonists based on a series of newly reported 3-(4-(2-propylphenoxy)butyl)imidazolidine-2,4-dione-based LXR&alpha<br />/&beta<br />dual agonists. Initially, Kohonen and stepwise multiple linear regression SW-MLR were performed to construct models for LXR&beta<br />agonists and LXR&alpha<br />agonists based on the structural characteristics of LXR&alpha<br />dual agonists, respectively. The obtained LXR&beta<br />agonist model gave a good predictive ability (R2train = 0.837, R2test = 0.843, Q2LOO = 0.715), and the LXR&alpha<br />agonist model produced even better predictive ability (R2train = 0.968, R2test = 0.914, Q2LOO = 0.895). Also, the two QSAR models were independent and can well distinguish LXR&beta<br />and LXR&alpha<br />activity. Then, compounds in the ZINC database met the lower limit of structural similarity of 0.7, compared to the 3-(4-(2-propylphenoxy)butyl)imidazolidine-2,4-dione scaffold subjected to our QSAR models, which resulted in the discovery of ZINC55084484 with an LXR&beta<br />prediction value of pEC50 equal to 7.343 and LXR&alpha<br />prediction value of pEC50 equal to &minus<br />1.901. Consequently, nine newly designed compounds were proposed as highly LXR&beta<br />selective agonists based on ZINC55084484 and molecular docking, of which LXR&beta<br />prediction values almost exceeded 8 and LXR&alpha<br />prediction values were below 0.
- Subjects :
- 0301 basic medicine
Agonist
LXRβ-selective agonists
Quantitative structure–activity relationship
Structural similarity
medicine.drug_class
In silico
Drug Evaluation, Preclinical
Pharmaceutical Science
Quantitative Structure-Activity Relationship
Pharmacology
digestive system
Lower limit
Article
Analytical Chemistry
lcsh:QD241-441
03 medical and health sciences
QSAR modeling
lcsh:Organic chemistry
Drug Discovery
medicine
polycyclic compounds
Animals
Computer Simulation
Physical and Theoretical Chemistry
Liver X receptor
Kohonen
Liver X Receptors
Chemistry
Organic Chemistry
food and beverages
nutritional and metabolic diseases
molecular docking
Zinc database
Molecular Docking Simulation
030104 developmental biology
Chemistry (miscellaneous)
Molecular Medicine
lipids (amino acids, peptides, and proteins)
Subjects
Details
- Language :
- English
- ISSN :
- 14203049
- Database :
- OpenAIRE
- Journal :
- Molecules
- Accession number :
- edsair.doi.dedup.....26f688e7794ab4b09aa6605fa5d65ed6
- Full Text :
- https://doi.org/10.3390/molecules23061349