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Roles of Electrostatics and Conformation in Protein-Crystal Interactions
- Source :
- Dentistry Publications, PLoS ONE, PLoS ONE, 5(2), e9330-1/11. Public Library of Science, PLoS ONE, Vol 5, Iss 2, p e9330 (2010)
- Publication Year :
- 2010
- Publisher :
- Scholarship@Western, 2010.
-
Abstract
- In vitro studies have shown that the phosphoprotein osteopontin (OPN) inhibits the nucleation and growth of hydroxyapatite (HA) and other biominerals. In vivo, OPN is believed to prevent the calcification of soft tissues. However, the nature of the interaction between OPN and HA is not understood. In the computational part of the present study, we used molecular dynamics simulations to predict the adsorption of 19 peptides, each 16 amino acids long and collectively covering the entire sequence of OPN, to the {100} face of HA. This analysis showed that there is an inverse relationship between predicted strength of adsorption and peptide isoelectric point (P
- Subjects :
- Models, Molecular
Circular dichroism
Protein Conformation
Molecular Conformation
lcsh:Medicine
Peptide
02 engineering and technology
Computational Biology/Molecular Dynamics
Bioinformatics
01 natural sciences
Biochemistry
Protein Structure, Secondary
chemistry.chemical_compound
Protein structure
Peptide synthesis
lcsh:Science
Peptide sequence
chemistry.chemical_classification
Multidisciplinary
Chemistry
Circular Dichroism
021001 nanoscience & nanotechnology
Amino acid
Crystallization
0210 nano-technology
Research Article
Protein Binding
Molecular Sequence Data
Static Electricity
Biophysics
Medical Biochemistry
Molecular Dynamics Simulation
010402 general chemistry
stomatognathic system
Computer Simulation
Amino Acid Sequence
lcsh:R
Computational Biology
0104 chemical sciences
Kinetics
Durapatite
Isoelectric point
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Phosphoprotein
Dentistry
Medical Biophysics
lcsh:Q
Osteopontin
Peptides
Subjects
Details
- ISSN :
- 19326203
- Database :
- OpenAIRE
- Journal :
- Dentistry Publications, PLoS ONE, PLoS ONE, 5(2), e9330-1/11. Public Library of Science, PLoS ONE, Vol 5, Iss 2, p e9330 (2010)
- Accession number :
- edsair.doi.dedup.....2406e88f95547b629ac5c23597ca238d