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Novel gene identified in an exome-wide association study of tanning dependence

Authors :
Joel Gelernter
David J. Leffell
Brenda Cartmel
Leah M. Ferrucci
Susan T. Mayne
Allen E. Bale
Andrew T. DeWan
Jerod L. Stapleton
Source :
Experimental Dermatology. 23:757-759
Publication Year :
2014
Publisher :
Wiley, 2014.

Abstract

Growing evidence suggests that some individuals may exhibit symptoms of dependence to ultraviolet light, a known carcinogen, in the context of tanning. Genetic associations with tanning dependence (TD) have not yet been explored. We conducted an exome-wide association study in 79 individuals who exhibited symptoms of TD and 213 individuals with volitional exposure to ultraviolet light, but who were not TD based on three TD scales. A total of 300 000 mostly exomic single nucleotide polymorphisms primarily in coding regions were assessed using an Affymetrix Axiom array. We performed a gene burden test with Bonferroni correction for the number of genes examined (P 0.05/14 904 = 3.36 × 10(-6) ). One gene, patched domain containing 2 (PTCHD2), yielded a statistically significant P-value of 2.5 × 10(-6) (OR = 0.27) with fewer individuals classified as TD having a minor allele at this locus. These results require replication, but are the first to support a specific genetic association with TD.

Details

ISSN :
09066705
Volume :
23
Database :
OpenAIRE
Journal :
Experimental Dermatology
Accession number :
edsair.doi.dedup.....23ef4c5e233366db061ac060cd1cd648