Back to Search
Start Over
DNA Microarray Analysis and Functional Profile of Pituitary Transcriptome Under Core-Clock Protein BMAL1 Control
- Source :
- Chronobiology International, Chronobiology International, Taylor & Francis, 2012, 29 (2), pp.103-130. ⟨10.3109/07420528.2011.645707⟩, Chronobiology International, Taylor & Francis, 2012, 29 (2), pp.103-30. ⟨10.3109/07420528.2011.645707⟩, Chronobiology International, 2012, 29 (2), pp.103-30. ⟨10.3109/07420528.2011.645707⟩, Chronobiology International, 2012, 29 (2), pp.103-130. ⟨10.3109/07420528.2011.645707⟩
- Publication Year :
- 2012
- Publisher :
- Informa UK Limited, 2012.
-
Abstract
- International audience; Although it is known to contain five cell types that synthesize and release hormones with a circadian pattern, the pituitary gland is poorly characterized as a circadian oscillator. By a differential microarray analysis, 252 genes were found to be differentially expressed in pituitaries from Bmal1(-/-) knockout versus wild-type mice. By integrative analyses of the data set with the Annotation, Visualization, and Integrated Discovery (DAVID) Bioinformatics Resources annotation analysis system, pituitary genes with altered expression in Bmal1(-/-) mice were dispatched among functional categories. Clusters of genes related to signaling and rhythmic processes as well as transcription regulators, in general, were found enriched in the data set, as were pathways such as circadian rhythm, transforming growth factor β (TGFβ) signaling, valine, leucine, and isoleucine degradation, and peroxisome proliferator-activated receptor (PPAR) signaling pathways. Gene Ontology term overrepresentation analyses revealed significant enrichment for genes involved in 10 key biological processes. To determine whether genes with altered expression in Bmal1(-/-) mice were actually circadian genes, we further characterized in the mouse pituitary gland the daily pattern of some of these genes, including core-clock genes. Core-clock genes and genes selected from three identified overrepresented biological processes, namely, hormone metabolic process, regulation of transcription from RNA polymerase II promoter, and cell adhesion, displayed a rhythmic pattern. Given the enrichment in genes dedicated to cell adhesion and their daily changes in the pituitary, it is hypothesized that cell-cell interactions could be involved in the transmission of information between endocrine cells, allowing rhythmic hormone outputs to be controlled in a temporally precise manner.
- Subjects :
- Male
Physiology
[SDV]Life Sciences [q-bio]
Molecular Sequence Data
Circadian clock
CLOCK Proteins
Gene Expression
Hormone metabolic process
Biology
Transcriptome
Mice
03 medical and health sciences
0302 clinical medicine
Biological Clocks
Physiology (medical)
Gene expression
Animals
[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM]
Gene
ComputingMilieux_MISCELLANEOUS
Oligonucleotide Array Sequence Analysis
030304 developmental biology
Mice, Knockout
Genetics
0303 health sciences
Microarray analysis techniques
Gene Expression Profiling
ARNTL Transcription Factors
Circadian Rhythm
Cell biology
Mice, Inbred C57BL
Gene expression profiling
Pituitary Gland
030217 neurology & neurosurgery
Subjects
Details
- ISSN :
- 15256073 and 07420528
- Volume :
- 29
- Database :
- OpenAIRE
- Journal :
- Chronobiology International
- Accession number :
- edsair.doi.dedup.....23de5d5d51530c949d8a68f4ebc8932b
- Full Text :
- https://doi.org/10.3109/07420528.2011.645707