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The complete nucleotide sequence of chloroplast genome of Gentiana apiata (Gentianaceae), an endemic medicinal herb in China
- Source :
- Mitochondrial DNA. Part B, Resources, article-version (VoR) Version of Record
- Publication Year :
- 2019
- Publisher :
- Taylor & Francis, 2019.
-
Abstract
- Gentiana apiata N. E. Brown (Gentianaceae) is a perennial herb plant and only grows in Qinba Mountains in China. Here, we first characterized the complete nucleotide sequence of chloroplast (cp) genome of G. apiata via Illumina next generation sequencing platform. The complete chloroplast genome of G. apiata was 144,274 bp in length, comprising of a large single copy (LSC) region of 77,353 bp, a small single copy (SSC) region of 17,009 bp, and two inverted repeat regions (IRs) of 24,956 bp. The cp genome contains 127 genes, including 82 protein-coding genes, 35 tRNA, eight rRNA genes, and two pseudogenes. Phylogenetic analysis based on 18 cp genome sequences showed that G. apiata closely related to congeneric species.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Gentianaceae
Phylogenetic tree
biology
Gentiana apiata
Nucleic acid sequence
Perennial herb
biology.organism_classification
010603 evolutionary biology
01 natural sciences
Genome
Chloroplast
03 medical and health sciences
030104 developmental biology
Botany
Genetics
Medicinal herbs
phylogenetic tree
chloroplast genome
Molecular Biology
Gentiana
Mitogenome Announcement
Research Article
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 4
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA. Part B, Resources
- Accession number :
- edsair.doi.dedup.....23277a27de2b57a9320470312b4c4c8b