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Docking Motif-Guided Mapping of the Interactome of Protein Phosphatase-1
- Source :
- Chemistry & Biology. (4):365-371
- Publisher :
- Elsevier Ltd.
-
Abstract
- SummaryThe ubiquitous protein Ser/Thr phosphatase-1 (PP1) interacts with dozens of regulatory proteins that are structurally unrelated. However, most of them share a short, degenerate “RVxF”-type docking motif. Using a broad in silico screening based on a stringent definition of the RVxF motif, in combination with a multistep biochemical validation procedure, we have identified 78 novel mammalian PP1 interactors. A global analysis of the validated RVxF-based PP1 interactome not only provided insights into the conserved features of the RVxF motif but also led to the discovery of additional common PP1 binding elements, described as the “SILK” and “MyPhoNE” motifs. In addition to the doubling of the known mammalian PP1 interactome, our data contribute to the design of PP1 interaction networks. Notably, an interaction network linking PP1 interactors discloses a pleiotropic role of PP1 in cell polarity.
- Subjects :
- animal structures
In silico
Clinical Biochemistry
macromolecular substances
Biology
Interactome
Biochemistry
environment and public health
Cell Line
Mice
Interaction network
Protein Phosphatase 1
Cell polarity
Drug Discovery
Protein Interaction Mapping
Animals
Humans
Protein Interaction Domains and Motifs
Molecular Biology
Genetics
Pharmacology
SYSBIO
fungi
Cell Polarity
Computational Biology
Protein phosphatase 1
General Medicine
Rats
enzymes and coenzymes (carbohydrates)
CHEMBIO
Docking (molecular)
SIGNALING
Molecular Medicine
Motif (music)
Subjects
Details
- Language :
- English
- ISSN :
- 10745521
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- Chemistry & Biology
- Accession number :
- edsair.doi.dedup.....228da6ce6b9014c741bf370ae7accd7c
- Full Text :
- https://doi.org/10.1016/j.chembiol.2009.02.012