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Enabling quantification of protein concentration in human serum biopsies using attenuated total reflectance – Fourier transform infrared (ATR-FTIR) spectroscopy

Authors :
Ruth Board
Franck Bonnier
Igor Chourpa
Hugh J. Byrne
Matthew J. Baker
Hélène Blasco
Clément Bruno
Katie Spalding
Isabelle Benz-de Bretagne
Holly J. Butler
Pretheepan Radhakrishnan
WestCHEM
University of Glasgow
Nanomédicaments et Nanosondes, EA 6295 (NMNS)
Université de Tours
Laboratoire de biochimie et biologie moléculaire, CHRU Tours
Centre Hospitalier Régional Universitaire de Tours (CHRU TOURS)
Rosemere Cancer Centre, Lancashire Teaching Hospitals NHS Trust, Royal Preston Hospital, Sharoe Green Lane, Preston
Focas Research Institute, DIT
Dublin Institute of Technology
Université de Tours (UT)
Centre Hospitalier Régional Universitaire de Tours (CHRU Tours)
Source :
Articles, Vibrational Spectroscopy, Vibrational Spectroscopy, Elsevier, 2018, 99, pp.50-58. ⟨10.1016/j.vibspec.2018.08.019⟩
Publication Year :
2018
Publisher :
Elsevier BV, 2018.

Abstract

International audience; Changes in protein concentrations within human blood are used as an indicator for nutritional state, hydration and underlying illnesses. They are often measured at regular clinical appointments and the current analytical process can result in long waiting times for results and the need for return patient visits. Attenuated total reflectance – Fourier transform infrared (ATR-FTIR) spectroscopy has the ability to detect minor molecular differences, qualitatively and quantitatively, in biofluid samples, without extensive sample preparation. ATR-FTIR can return an analytical measurement almost instantaneously and therefore could be deemed as an ideal technique for monitoring molecular alterations in blood within the clinic.To determine the suitability of using ATR-FTIR spectroscopy to enable protein quantification in a clinical setting, pooled human serum samples spiked with varying concentrations of human serum albumin (HSA) and immunoglobulin G (IgG) were analysed, before analysing patient clinical samples. Using a validated partial least squares method, the spiked samples (IgG) produced a linearity as high as 0.998 and a RMSEV of 0.49 ± 0.05 mg mL−1, with the patient samples producing R2 values of 0.992 and a corresponding RMSEV of 0.66 ± 0.05 mg mL−1. This claim was validated using two blind testing models, leave one patient out cross validation and k-fold cross validation, achieving optimum linearity and RMSEV values of 0.934 and 1.99 ± 0.79 mg mL−1, respectively.This demonstrates that ATR-FTIR is able to quantify protein within clinically relevant complex matrices and concentrations, such as serum samples, rapidly and with simple sample preparation. The ability to provide a quantification step, along with rapid disease classification, from a spectroscopic signature will aid clinical translation of vibrational spectroscopy to assist with problems currently faced with patient diagnostic pathways.

Details

ISSN :
09242031
Volume :
99
Database :
OpenAIRE
Journal :
Vibrational Spectroscopy
Accession number :
edsair.doi.dedup.....216ca4ee26bddbb407d1cae61ad35899