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Electrostatic Effects on the Stability of Peptide Radicals
- Source :
- The journal of physical chemistry. B. 122(38)
- Publication Year :
- 2018
-
Abstract
- We explored the influence of external electric fields (EEFs) on the stability of a glycine dipeptide model radical using high-level quantum chemical methods. Remotely located ions (Cl-/Na+) are used to implement EEF effects. The effects of these ions are reproduced using background point charges and oriented EEFs. Remote charges as far as 900 pm from the C-alpha radical center can be significantly stabilizing or destabilizing as a function of their relative orientation. The magnitude of these effects is also strongly dependent on the distance between the radical center and the charge location. After examining the strengths and weaknesses of some frequently used quantum mechanics methods in describing these effects properly, a comparison is made on the stability of dipeptide radicals bearing protonable or deprotonable side chains. In this group, the stability of the respective C-alpha radicals mainly depends on the preferred orientation of the charge-carrying side chain.
- Subjects :
- Models, Molecular
Free Radicals
Protein Conformation
Radical
Static Electricity
Peptide
02 engineering and technology
010402 general chemistry
01 natural sciences
Stability (probability)
Ion
chemistry.chemical_compound
Chlorides
Electric field
Materials Chemistry
Side chain
Physical and Theoretical Chemistry
chemistry.chemical_classification
Dipeptide
Glycylglycine
Protein Stability
Sodium
Charge (physics)
Dipeptides
021001 nanoscience & nanotechnology
0104 chemical sciences
Surfaces, Coatings and Films
chemistry
Models, Chemical
Chemical physics
Quantum Theory
Thermodynamics
0210 nano-technology
Subjects
Details
- ISSN :
- 15205207
- Volume :
- 122
- Issue :
- 38
- Database :
- OpenAIRE
- Journal :
- The journal of physical chemistry. B
- Accession number :
- edsair.doi.dedup.....207626fb1bd77f6f37965dca6eaa6d50