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RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues

Authors :
Jonna Grimsby
Nicholas J. Haradhvala
Julian M. Hess
Hailei Zhang
Eila Arich-Landkof
Paz Polak
Chip Stewart
Philip A. Branton
Gad Getz
Noam Shoresh
Ruslana Frazer
Kristin G. Ardlie
Jaegil Kim
Keren Yizhak
Dimitri Livitz
Daniel Rosebrock
K Kübler
François Aguet
Ayellet V. Segrè
Xiao Li
Source :
Science. 364
Publication Year :
2019
Publisher :
American Association for the Advancement of Science (AAAS), 2019.

Abstract

Somatic mosaicism in normal tissues Somatic cells can accumulate mutations over the course of an individual's lifetime. This generates cells that differ genetically at specific loci within the genome. To explore how this genetic diversity in individuals contributes to disease, Yizhak et al. developed a method to detect mutations from RNA sequencing data (see the Perspective by Tomasetti). Applying this method to Cancer Genome Atlas samples and normal samples from the Genotype-Tissue Expression (GTEx) project generated a tissue-specific study of mutation accumulation. Somatic mutations were detected in nearly all individuals and across many normal human tissues in genomic regions called cancer hotspots and in genes that play a role in cancer. Interestingly, the skin, lung, and esophagus exhibited the most mutations, suggesting that the environment generates many human mutations. Science , this issue p. eaaw0726 ; see also p. 938

Details

ISSN :
10959203 and 00368075
Volume :
364
Database :
OpenAIRE
Journal :
Science
Accession number :
edsair.doi.dedup.....1f2b8615f5998aa7235745a555da0d0f
Full Text :
https://doi.org/10.1126/science.aaw0726