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Genome-wide analysis of PYL-PP2C-SnRK2s family in Camellia sinensis
- Source :
- Bioengineered, Vol 11, Iss 1, Pp 103-115 (2020), Bioengineered
- Publication Year :
- 2020
- Publisher :
- Taylor & Francis Group, 2020.
-
Abstract
- Abscisic acid (ABA) signaling regulates plant growth and development and participates in response to abiotic stressors. However, details about the PYL-PP2C-SnRK2 gene family, which is the core component of ABA signaling in Camellia sinensis, are unknown. In this work, we identified 14 pyrabactin resistance-likes (PYLs), 84 type 2C protein phosphatase (PP2Cs), and 8 SNF1-related protein kinase 2s (SnRK2s) from C. sinensis. The transcriptomic analysis indicated that PYL-PP2C-SnRK2s were associated with changes of leaf color and the response of C. sinensis to drought and salt stressors. Changes of the expression of Snrk2s were not significant in the process of leaf color change or drought and salt stress response, suggesting that PYLs and PP2Cs may not interact with SnRK2s in C. sinensis during these processes. Finally, Gene Regulatory Network (GRN) construction and interaction networks analysis demonstrated that PYLs and PP2Cs were associated with multiple metabolic pathways during the changes of leaf color.<br />Graphical Abstract
- Subjects :
- 0106 biological sciences
0301 basic medicine
snrk2
Gene regulatory network
Bioengineering
gene regulatory network
Protein Serine-Threonine Kinases
Biology
01 natural sciences
Applied Microbiology and Biotechnology
Transcriptome
abscisic acid
03 medical and health sciences
chemistry.chemical_compound
Gene Expression Regulation, Plant
Gene family
Camellia sinensis
Protein kinase A
Abscisic acid
Plant Proteins
pyls
Pyrabactin
Genetics
camellia sinensis
fungi
food and beverages
General Medicine
Protein Phosphatase 2C
Metabolic pathway
030104 developmental biology
chemistry
Multigene Family
pp2cs
Genome, Plant
TP248.13-248.65
Research Paper
010606 plant biology & botany
Biotechnology
Subjects
Details
- Language :
- English
- ISSN :
- 21655987 and 21655979
- Volume :
- 11
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Bioengineered
- Accession number :
- edsair.doi.dedup.....1d19161ee71601c657a7461bcd16ca60