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Dynamics of the intrinsically disordered protein CP12 in its association with GAPDH in the green alga Chlamydomonas reinhardtii: a fuzzy complex
- Source :
- Molecular BioSystems, Molecular BioSystems, Royal Society of Chemistry, 2013, 9 (11), pp.2869--2876. ⟨10.1039/c3mb70190e⟩, Molecular BioSystems, 2013, 9 (11), pp.2869--2876. ⟨10.1039/c3mb70190e⟩
- Publication Year :
- 2013
- Publisher :
- HAL CCSD, 2013.
-
Abstract
- International audience; CP12 is a widespread regulatory protein of oxygenic photosynthetic organisms that contributes to the regulation of the Calvin cycle by forming a supra-molecular complex with at least two enzymes: glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK). CP12 shares some similarities with intrinsically disordered proteins (IDPs) depending on its redox state. In this study, site-directed spin labeling (SDSL) combined with EPR spectroscopy was used to probe the dynamic behavior of CP12 from Chlamydomonas reinhardtii upon binding to GAPDH, the first step towards ternary complex formation. The two N-terminal cysteine residues were labeled using the classical approach while the tyrosine located at the C-terminal end of CP12 was modified following an original procedure. The results show that the label grafted at the C-terminal extremity is in the vicinity of the interaction site whereas the N-terminal region remains fully disordered upon binding to GAPDH. In conclusion, GAPDH-CP12 is a fuzzy complex, in which the N-terminal region of CP12 keeps a conformational freedom in the bound form. This fuzziness could be one of the keys to facilitate binding of PRK to CP12-GAPDH and to form the ternary supra-molecular complex.
- Subjects :
- Models, Molecular
Protein Conformation
Chlamydomonas reinhardtii
Plasma protein binding
Biology
Intrinsically disordered proteins
Substrate Specificity
03 medical and health sciences
Protein structure
stomatognathic system
[CHIM]Chemical Sciences
Protein Interaction Domains and Motifs
Photosynthesis
Molecular Biology
Ternary complex
Plant Proteins
030304 developmental biology
0303 health sciences
Phosphoribulokinase
030302 biochemistry & molecular biology
Glyceraldehyde-3-Phosphate Dehydrogenases
Site-directed spin labeling
biology.organism_classification
Kinetics
Biochemistry
Protein Binding
Biotechnology
Cysteine
Subjects
Details
- Language :
- English
- ISSN :
- 1742206X and 17422051
- Database :
- OpenAIRE
- Journal :
- Molecular BioSystems, Molecular BioSystems, Royal Society of Chemistry, 2013, 9 (11), pp.2869--2876. ⟨10.1039/c3mb70190e⟩, Molecular BioSystems, 2013, 9 (11), pp.2869--2876. ⟨10.1039/c3mb70190e⟩
- Accession number :
- edsair.doi.dedup.....1c0ea26c0e94809a0c9cda40402899c3
- Full Text :
- https://doi.org/10.1039/c3mb70190e⟩