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WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene
- Source :
- Nersisyan, L, Nikoghosyan, M, Francioli, L C, Menelaou, A, Pulit, S L, Elbers, C C, Kloosterman, W P, van Setten, J, Nijman, I J, Renkens, I, de Bakker, P I W, van Dijk, F, Neerincx, P B T, Deelen, P, Kanterakis, A, Dijkstra, M, Byelas, H, van der Velde, K J, Platteel, M, Swertz, M A, Wijmenga, C, Palamara, P F, Pe'er, I, Ye, K, Lameijer, E-W, Moed, M H, Beekman, M, de Craen, A J M, Suchiman, H E D, Slagboom, P E, Guryev, V, Abdellaoui, A, Hottenga, J J, Kattenberg, M, Willemsen, G, Boomsma, D I, van Leeuwen, E M, Karssen, L C, Amin, N, Rivadeneira, F, Isaacs, A, Hofman, A, Uitterlinden, A G, van Duijn, C M, van Oven, M, Kayser, M, Vermaat, M, Laros, J F J, den Dunnen, J T, van Enckevort, D, Mei, H, Li, M, Stoneking, M, van Schaik, B D C, Bot, J, Marschall, T, Schonhuth, A, Hehir-Kwa, J Y, Handsaker, R E, Polak, P, Sohail, M, Vuzman, D, Estrada, K, McCarroll, S A, Sunyaev, S R, Hormozdiari, F, Koval, V, Medina-Gomez, C, Oostra, B, Veldink, J H, van den Berg, L H, Pitts, S J, Potluri, S, Sundar, P, Cox, D R, de Knijff, P, Li, Q, Li, Y, Du, Y, Chen, R, Cao, H, Wang, J, Li, N, Cao, S, Bovenberg, J A, van Ommen, G-J B & Arakelyan, A 2019, ' WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene ', Scientific Reports, vol. 9, 18758 . https://doi.org/10.1038/s41598-019-55109-7, Scientific Reports, 9(1):18758, 1-9. Nature Publishing Group, Scientific Reports, 9(1):18758. Nature Publishing Group, Scientific Reports, 9(1). Nature Publishing Group, Scientific Reports, 9. NATURE PUBLISHING GROUP, Nature Scientific Reports, 9(1), Scientific Reports, Vol 9, Iss 1, Pp 1-9 (2019), Scientific Reports, 9:18758. Nature Publishing Group, Scientific reports, 9(1):18758. Nature Publishing Group, Scientific reports, vol 9, iss 1, Nersisyan, L, Arakelyan, A, Abdellaoui, A, Jan Hottenga, J, Kattenberg, M, Willemsen, G, Boomsma, D I & The Genome of the Netherlands consortium 2019, ' WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene ', Scientific Reports, vol. 9, no. 1, 18758, pp. 1-9 . https://doi.org/10.1038/s41598-019-55109-7, Scientific Reports
- Publication Year :
- 2019
-
Abstract
- Telomere length (TL) regulation is an important factor in ageing, reproduction and cancer development. Genetic, hereditary and environmental factors regulating TL are currently widely investigated, however, their relative contribution to TL variability is still understudied. We have used whole genome sequencing data of 250 family trios from the Genome of the Netherlands project to perform computational measurement of TL and a series of regression and genome-wide association analyses to reveal TL inheritance patterns and associated genetic factors. Our results confirm that TL is a largely heritable trait, primarily with mother’s, and, to a lesser extent, with father’s TL having the strongest influence on the offspring. In this cohort, mother’s, but not father’s age at conception was positively linked to offspring TL. Age-related TL attrition of 40 bp/year had relatively small influence on TL variability. Finally, we have identified TL-associated variations in ribonuclease reductase catalytic subunit M1 (RRM1 gene), which is known to regulate telomere maintenance in yeast. We also highlight the importance of multivariate approach and the limitations of existing tools for the analysis of TL as a polygenic heritable quantitative trait.
- Subjects :
- Male
Telomere Homeostasis/genetics
Netherlands Twin Register (NTR)
Non-Mendelian inheritance
lcsh:Medicine
Datasets as Topic
Ribonucleoside Diphosphate Reductase/genetics
Genome of the Netherlands consortium
Genome informatics
Genome
0302 clinical medicine
Models
80 and over
Inheritance Patterns
lcsh:Science
Child
Netherlands
Genetics
Aged, 80 and over
0303 health sciences
Multidisciplinary
Age Factors
Functional genomics
Single Nucleotide
ASSOCIATION
Telomere
Middle Aged
030220 oncology & carcinogenesis
Trait
Female
Maternal Inheritance
Biotechnology
Maternal Age
Adult
Ribonucleoside Diphosphate Reductase
Adolescent
Offspring
PROTEINS
Quantitative trait locus
Biology
Polymorphism, Single Nucleotide
Article
Paternal Age
03 medical and health sciences
Young Adult
Sex Factors
LUNG-CANCER
Genetic
Humans
Polymorphism
Telomere/metabolism
General
Gene
METAANALYSIS
030304 developmental biology
Aged
Whole genome sequencing
Models, Genetic
Whole Genome Sequencing
Human Genome
lcsh:R
Telomere Homeostasis
SIZE
SUBUNIT
CELLS
Linear Models
lcsh:Q
Genome-Wide Association Study
Subjects
Details
- Language :
- English
- ISSN :
- 20452322
- Database :
- OpenAIRE
- Journal :
- Nersisyan, L, Nikoghosyan, M, Francioli, L C, Menelaou, A, Pulit, S L, Elbers, C C, Kloosterman, W P, van Setten, J, Nijman, I J, Renkens, I, de Bakker, P I W, van Dijk, F, Neerincx, P B T, Deelen, P, Kanterakis, A, Dijkstra, M, Byelas, H, van der Velde, K J, Platteel, M, Swertz, M A, Wijmenga, C, Palamara, P F, Pe'er, I, Ye, K, Lameijer, E-W, Moed, M H, Beekman, M, de Craen, A J M, Suchiman, H E D, Slagboom, P E, Guryev, V, Abdellaoui, A, Hottenga, J J, Kattenberg, M, Willemsen, G, Boomsma, D I, van Leeuwen, E M, Karssen, L C, Amin, N, Rivadeneira, F, Isaacs, A, Hofman, A, Uitterlinden, A G, van Duijn, C M, van Oven, M, Kayser, M, Vermaat, M, Laros, J F J, den Dunnen, J T, van Enckevort, D, Mei, H, Li, M, Stoneking, M, van Schaik, B D C, Bot, J, Marschall, T, Schonhuth, A, Hehir-Kwa, J Y, Handsaker, R E, Polak, P, Sohail, M, Vuzman, D, Estrada, K, McCarroll, S A, Sunyaev, S R, Hormozdiari, F, Koval, V, Medina-Gomez, C, Oostra, B, Veldink, J H, van den Berg, L H, Pitts, S J, Potluri, S, Sundar, P, Cox, D R, de Knijff, P, Li, Q, Li, Y, Du, Y, Chen, R, Cao, H, Wang, J, Li, N, Cao, S, Bovenberg, J A, van Ommen, G-J B & Arakelyan, A 2019, ' WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene ', Scientific Reports, vol. 9, 18758 . https://doi.org/10.1038/s41598-019-55109-7, Scientific Reports, 9(1):18758, 1-9. Nature Publishing Group, Scientific Reports, 9(1):18758. Nature Publishing Group, Scientific Reports, 9(1). Nature Publishing Group, Scientific Reports, 9. NATURE PUBLISHING GROUP, Nature Scientific Reports, 9(1), Scientific Reports, Vol 9, Iss 1, Pp 1-9 (2019), Scientific Reports, 9:18758. Nature Publishing Group, Scientific reports, 9(1):18758. Nature Publishing Group, Scientific reports, vol 9, iss 1, Nersisyan, L, Arakelyan, A, Abdellaoui, A, Jan Hottenga, J, Kattenberg, M, Willemsen, G, Boomsma, D I & The Genome of the Netherlands consortium 2019, ' WGS-based telomere length analysis in Dutch family trios implicates stronger maternal inheritance and a role for RRM1 gene ', Scientific Reports, vol. 9, no. 1, 18758, pp. 1-9 . https://doi.org/10.1038/s41598-019-55109-7, Scientific Reports
- Accession number :
- edsair.doi.dedup.....1bbec0f3bca0eb566284734623f469e3
- Full Text :
- https://doi.org/10.1038/s41598-019-55109-7