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Transcriptomic profiling for prolonged drought in Dendrobium catenatum

Authors :
Long-Hai Zou
Yan Wang
Xiao Wan
Bao-Qiang Zheng
Ying-Qiu Tian
Source :
Scientific Data
Publication Year :
2018
Publisher :
Springer Science and Business Media LLC, 2018.

Abstract

Orchid epiphytes, a group containing at least 18,000 species, thrive in habitats that often undergo periodic drought stress. However, few global gene expression profiling datasets have been published for studies addressing the drought-resistant mechanism of this special population. In this study, an experiment involving the effect of continuous drought treatments on an epiphytic orchid, Dendrobium catenatum, was designed to generate 39 mature-leaf-tissue RNA-seq sequencing datasets with over two billion reads. These datasets were validated by a series of quality assessments including RNA sample quality, RNA-seq read quality, and global gene expression profiling. We believe that these comprehensive transcriptomic resources will allow a better understanding of the drought-resistant mechanisms of orchid epiphytes.

Details

ISSN :
20524463
Volume :
5
Database :
OpenAIRE
Journal :
Scientific Data
Accession number :
edsair.doi.dedup.....1af28ab459fa66e0eaa2faeb31f782d9