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Breast cancer biobank from a single institutional cohort in an urban setting in india: Tumor characteristics and survival outcomes

Authors :
Priya Shinde
Ankita Patil
Chaitanyanand B. Koppiker
Beenu Varghese
Wimpy Kumari
Namrata Namewar
Mangal Jagtap
Roli Kushwaha
Rituja A. Banale
Ruhi Reddy
Chetan Deshmukh
L S Shashidhara
Rashmi Alhat
Rohini Unde
George Thomas
Smeeta Nare
Madhura Kulkarni
Ashwini Bapat
Pooja Deshpande
Ruth Navgire
Santosh Dixit
Laleh Busheri
Devaki A. Kelkar
Rateeka Johari
S.K. Shaikh
Aishwarya Konnur
Source :
Cancer Treatment and Research Communications, Vol 28, Iss, Pp 100409-(2021)
Publication Year :
2021

Abstract

250 words Background A breast cancer biobank with retrospectively collected patient data and FFPE tissue samples was established in 2018 at Prashanti Cancer Care Mission, Pune, India. It runs a cancer care clinic with support from a single surgeon's breast cancer practice. The clinical data and tissue sample collection is undertaken with appropriate patient consent following ethical approval and guidelines. Methods The biobank holds clinical history, diagnostic reports, treatment and follow-up information along with FFPE tumor tissue specimens, adjacent normal and, in few cases, contralateral normal breast tissue. Detailed family history and germline mutational profiles of eligible and consenting patients and their relatives are also deposited in the biobank. Results Here, we report the first audit of the biobank. A total number of 994 patients with breast disease have deposited consented clinical records in the biobank. The majority of the records (80%, n = 799) are of patients with infiltrating ductal carcinoma (IDC). Of 799 IDC patients, 434 (55%) have deposited tumor tissue in the biobank with consent. In addition, germline mutation profiles of 84 patients and their family members are deposited. Follow-up information is available for 85% of the 434 IDC patients with an average follow-up of 3 years. Conclusion The biobank has aided the initiation of translational research at our center in collaboration with eminent institutes like IISER Pune and SJRI Bangalore to evaluate profiles of breast cancer in an Indian cohort. The biobank will be a valuable resource to the breast cancer research community, especially to understand South Asian profiles of breast cancer.

Details

ISSN :
24682942
Volume :
28
Database :
OpenAIRE
Journal :
Cancer treatment and research communications
Accession number :
edsair.doi.dedup.....1acdd3dba62c951512bc131b5226cc2f