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Molecular and chemical characterization of a Sphagnum palustre clone: Key steps towards a standardized and sustainable moss bag technique
- Source :
- Ecological Indicators, Ecological Indicators, Elsevier, 2016, 71, pp.388--397. ⟨10.1016/j.ecolind.2016.06.044⟩, Ecological Indicators, Elsevier, 2016, 71, pp.388-397. ⟨10.1016/j.ecolind.2016.06.044⟩, Ecological Indicators, 2016, 71, pp.388-397. ⟨10.1016/j.ecolind.2016.06.044⟩
- Publication Year :
- 2016
-
Abstract
- 00002 ăWOS:000388157900039; International audience; This work aimed to define the molecular and chemical signature of a S. palustre clone developed in the framework of the EU-FP7 Mossclone project to improve the standardization and reliability of the moss bag technique. The molecular characterization was performed by a set of DNA molecular markers (RAPD, ISJ, PCR-RFLP, sequencing and microsatellites) to tag the clone produced within the project. Molecular characterization also provided new DNA markers that can be applied in systematic analyses of Sphagnum, and gave new insights to implement well established techniques. The elemental composition of the clone was measured by ICP-MS analysis of 54 major and trace elements, with and without commonly applied pre-exposure treatments (oven devitalization and EDTA washing). Concentrations of almost all analyzed elements were significantly lower (from 10 to 100 times) in the clone than in conspecific field moss, apart from some elements (K, Mo, P and Na) deriving from the culture medium or EDTA treatment. Oven devitalization and EDTA washing did not significantly affect the clone composition. A comparison between the elemental composition of the clone with that of naturally growing Sphagnum species proved the particularly low elemental content of the clone. Therefore, in view of a rigorously standardized moss-bag protocol for the monitoring of persistent atmospheric pollutants, the use of the S. palustre clone, a biomaterial with very low and constant element composition, and homogenous morphological characteristics is strongly recommended. (C) 2016 Elsevier Ltd. All rights reserved.
- Subjects :
- 010504 meteorology & atmospheric sciences
Evolution
Moss bags
urban areas
Clone (cell biology)
General Decision Sciences
Sphagnum palustre
010501 environmental sciences
Biology
lichen
01 natural sciences
Sphagnum
deposition
Behavior and Systematics
Botany
monitoring devices
pollution
Atmospheric pollution
Biomonitoring
DNA molecular markers
Trace elements
Decision Sciences (all)
Ecology, Evolution, Behavior and Systematics
Ecology
0105 earth and related environmental sciences
particulate matter
ACL
trace-elements
biology.organism_classification
Moss
Ecology, Evolution, Behavior and Systematic
RAPD
Moss bag
Genetic marker
Trace element
Microsatellite
metal concentrations
Composition (visual arts)
genetic-variation
DNA molecular marker
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
element accumulation
Subjects
Details
- Language :
- English
- ISSN :
- 1470160X
- Database :
- OpenAIRE
- Journal :
- Ecological Indicators, Ecological Indicators, Elsevier, 2016, 71, pp.388--397. ⟨10.1016/j.ecolind.2016.06.044⟩, Ecological Indicators, Elsevier, 2016, 71, pp.388-397. ⟨10.1016/j.ecolind.2016.06.044⟩, Ecological Indicators, 2016, 71, pp.388-397. ⟨10.1016/j.ecolind.2016.06.044⟩
- Accession number :
- edsair.doi.dedup.....1a4e8994cd5ec045e760b12e0f71980d