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BRD4 localization to lineage-specific enhancers is associated with a distinct transcription factor repertoire

Authors :
Eric Hesse
Tareq Hossan
Steven A. Johnsen
Upasana Bedi
Simon J. Baumgart
Stefan Knapp
Zeynab Najafova
John R. Hawse
Geske Schmidt
Sankari Nagarajan
Roberto Tirado-Magallanes
Vivek Mishra
Malayannan Subramaniam
Source :
Nucleic Acids Research, Europe PubMed Central, Najafova, Z, Tirado-magallanes, R, Subramaniam, M, Hossan, T, Schmidt, G, Nagarajan, S, Baumgart, S J, Mishra, V, Bedi, U, Hesse, E, Knapp, S, Hawse, J R & Johnsen, S A 2017, ' BRD4 localization to lineage-specific enhancers is associated with a distinct transcription factor repertoire ', Nucleic acids research, vol. 45, no. 1, pp. 127-141 . https://doi.org/10.1093/nar/gkw826
Publication Year :
2016
Publisher :
Oxford University Press (OUP), 2016.

Abstract

Proper temporal epigenetic regulation of gene expression is essential for cell fate determination and tissue development. The Bromodomain-containing Protein-4 (BRD4)was previously shown to control the transcription of defined subsets of genes in various cell systems. In this study we examined the role of BRD4 in promoting lineage-specific gene expression and show that BRD4 is essential for osteoblast differentiation. Genome-wide analyses demonstrate that BRD4 is recruited to the transcriptional start site of differentiation-induced genes. Unexpectedly, while promoter-proximal BRD4 occupancy correlated with gene expression, genes which displayed moderate expression and promoter-proximal BRD4 occupancy were most highly regulated and sensitive to BRD4 inhibition. Therefore, we examined distal BRD4 occupancy and uncovered a specific co-localization of BRD4 with the transcription factors C/EBPb, TEAD1, FOSL2 and JUND at putative osteoblast-specific enhancers. These findings reveal the intricacies of lineage specification and provide new insight into the context-dependent functions of BRD4. peerReviewed

Details

ISSN :
13624962 and 03051048
Volume :
45
Database :
OpenAIRE
Journal :
Nucleic Acids Research
Accession number :
edsair.doi.dedup.....1a2be91de4abf115fc4355a00ee18b2a
Full Text :
https://doi.org/10.1093/nar/gkw826