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BRD4 localization to lineage-specific enhancers is associated with a distinct transcription factor repertoire
- Source :
- Nucleic Acids Research, Europe PubMed Central, Najafova, Z, Tirado-magallanes, R, Subramaniam, M, Hossan, T, Schmidt, G, Nagarajan, S, Baumgart, S J, Mishra, V, Bedi, U, Hesse, E, Knapp, S, Hawse, J R & Johnsen, S A 2017, ' BRD4 localization to lineage-specific enhancers is associated with a distinct transcription factor repertoire ', Nucleic acids research, vol. 45, no. 1, pp. 127-141 . https://doi.org/10.1093/nar/gkw826
- Publication Year :
- 2016
- Publisher :
- Oxford University Press (OUP), 2016.
-
Abstract
- Proper temporal epigenetic regulation of gene expression is essential for cell fate determination and tissue development. The Bromodomain-containing Protein-4 (BRD4)was previously shown to control the transcription of defined subsets of genes in various cell systems. In this study we examined the role of BRD4 in promoting lineage-specific gene expression and show that BRD4 is essential for osteoblast differentiation. Genome-wide analyses demonstrate that BRD4 is recruited to the transcriptional start site of differentiation-induced genes. Unexpectedly, while promoter-proximal BRD4 occupancy correlated with gene expression, genes which displayed moderate expression and promoter-proximal BRD4 occupancy were most highly regulated and sensitive to BRD4 inhibition. Therefore, we examined distal BRD4 occupancy and uncovered a specific co-localization of BRD4 with the transcription factors C/EBPb, TEAD1, FOSL2 and JUND at putative osteoblast-specific enhancers. These findings reveal the intricacies of lineage specification and provide new insight into the context-dependent functions of BRD4. peerReviewed
- Subjects :
- 0301 basic medicine
GAL4/UAS system
Proto-Oncogene Proteins c-jun
Response element
Pair-rule gene
Cell Cycle Proteins
Fos-Related Antigen-2
Biology
Osteocytes
Cell Line
Epigenesis, Genetic
03 medical and health sciences
Cell Line, Tumor
Genetics
Humans
Cell Lineage
Promoter Regions, Genetic
Enhancer
Transcription factor
TEAD1
Osteoblasts
BRD4
lineage-specific enhancers
CCAAT-Enhancer-Binding Protein-beta
Gene Expression Profiling
Gene regulation, Chromatin and Epigenetics
Nuclear Proteins
TEA Domain Transcription Factors
Cell Differentiation
Epithelial Cells
Mesenchymal Stem Cells
Promoter
DNA-Binding Proteins
Gene expression profiling
030104 developmental biology
Organ Specificity
Transcription Initiation Site
Protein Binding
Signal Transduction
Transcription Factors
Subjects
Details
- ISSN :
- 13624962 and 03051048
- Volume :
- 45
- Database :
- OpenAIRE
- Journal :
- Nucleic Acids Research
- Accession number :
- edsair.doi.dedup.....1a2be91de4abf115fc4355a00ee18b2a
- Full Text :
- https://doi.org/10.1093/nar/gkw826