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Fungal diversity in deep-sea sediments from Magellan seamounts environment of the western Pacific revealed by high-throughput Illumina sequencing
- Source :
- Journal of Microbiology. 58:841-852
- Publication Year :
- 2020
- Publisher :
- Springer Science and Business Media LLC, 2020.
-
Abstract
- There are lots of seamounts globally whose primary production is disproportionally greater than the surrounding areas. Compared to other deep-sea environments, however, the seamounts environment is relatively less explored for fungal diversity. In the present study, we explored the fungal community structure in deep-sea sediments from four different stations of the Magellan seamounts environment by using high-throughput sequencing of the ITS1 region. A total of 1,897,618 ITS1 sequences were obtained. Among these sequences, fungal ITS1 sequences could be clustered into 1,662 OTUs. The majority of these sequences belonged to Ascomycota. In the genera level, the most abundant genus was Mortierella (4.79%), which was reported as a common fungal genus in soil and marine sediments, followed by Umbelopsis (3.80%), Cladosporium (2.98%), Saccharomycopsis (2.53%), Aspergillus (2.42%), Hortaea (2.36%), Saitozyma (2.20%), Trichoderma (2.12%), Penicillium (2.11%), Russula (1.86%), and Verticillium (1.40%). Most of these recovered genera belong to Ascomycota. The Bray-Curtis analysis showed that there was 37 to 85% dissimilarity of fungal communities between each two sediment samples. The Principal coordinates analysis clearly showed variations in the fungal community among different sediment samples. These results suggested that there was a difference in fungal community structures not only among four different sampling stations but also for different layers at the same station. The depth and geographical distance significantly affect the fungal community, and the effect of depth and geographical distance on the structure of the fungal community in the Magellan seamounts is basically same. Most of the fungi were more or less related to plants, these plant parasitic/symbiotic/endophytic fungi constitute a unique type of seamounts environmental fungal ecology, different from other marine ecosystems.
- Subjects :
- Geologic Sediments
Seamount
Applied Microbiology and Biotechnology
Microbiology
Plant use of endophytic fungi in defense
03 medical and health sciences
DNA, Ribosomal Spacer
Botany
Seawater
Ecosystem
Illumina dye sequencing
030304 developmental biology
0303 health sciences
geography
Pacific Ocean
geography.geographical_feature_category
Ascomycota
biology
030306 microbiology
Fungi
Community structure
High-Throughput Nucleotide Sequencing
Sequence Analysis, DNA
General Medicine
biology.organism_classification
Verticillium
Russula
Mycobiome
Cladosporium
Subjects
Details
- ISSN :
- 19763794 and 12258873
- Volume :
- 58
- Database :
- OpenAIRE
- Journal :
- Journal of Microbiology
- Accession number :
- edsair.doi.dedup.....19f0651f449def847a11b17b5c4536e6