Back to Search
Start Over
Sparse image reconstruction for molecular imaging
- Publication Year :
- 2008
- Publisher :
- arXiv, 2008.
-
Abstract
- The application that motivates this paper is molecular imaging at the atomic level. When discretized at sub-atomic distances, the volume is inherently sparse. Noiseless measurements from an imaging technology can be modeled by convolution of the image with the system point spread function (psf). Such is the case with magnetic resonance force microscopy (MRFM), an emerging technology where imaging of an individual tobacco mosaic virus was recently demonstrated with nanometer resolution. We also consider additive white Gaussian noise (AWGN) in the measurements. Many prior works of sparse estimators have focused on the case when H has low coherence; however, the system matrix H in our application is the convolution matrix for the system psf. A typical convolution matrix has high coherence. The paper therefore does not assume a low coherence H. A discrete-continuous form of the Laplacian and atom at zero (LAZE) p.d.f. used by Johnstone and Silverman is formulated, and two sparse estimators derived by maximizing the joint p.d.f. of the observation and image conditioned on the hyperparameters. A thresholding rule that generalizes the hard and soft thresholding rule appears in the course of the derivation. This so-called hybrid thresholding rule, when used in the iterative thresholding framework, gives rise to the hybrid estimator, a generalization of the lasso. Unbiased estimates of the hyperparameters for the lasso and hybrid estimator are obtained via Stein's unbiased risk estimate (SURE). A numerical study with a Gaussian psf and two sparse images shows that the hybrid estimator outperforms the lasso.<br />Comment: 12 pages, 8 figures
- Subjects :
- Point spread function
Sparse image
Magnetic Resonance Spectroscopy
Models, Statistical
Computer science
Estimator
Proteins
FOS: Physical sciences
Microscopy, Atomic Force
Computer Graphics and Computer-Aided Design
Thresholding
Convolution
symbols.namesake
Additive white Gaussian noise
Lasso (statistics)
Physics - Data Analysis, Statistics and Probability
Viruses
symbols
Image Processing, Computer-Assisted
Coherence (signal processing)
Computer Simulation
Algorithm
Software
Algorithms
Data Analysis, Statistics and Probability (physics.data-an)
Subjects
Details
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....187bb0a46154880e36ce19b85402673b
- Full Text :
- https://doi.org/10.48550/arxiv.0809.4079