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iTRAQ-based proteomic profiling, pathway analyses, and apoptotic mechanism in the Antarctic copepod Tigriopus kingsejongensis in response to ultraviolet B radiation
- Source :
- Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology. 248:109120
- Publication Year :
- 2021
- Publisher :
- Elsevier BV, 2021.
-
Abstract
- iTRAQ proteomic profiling was conducted to examine the proteomic responses of the Antarctic copepod Tigriopus kingsejongensis under ultraviolet B (UVB) exposure. Of the 5507 proteins identified, 3479 proteins were annotated and classified into 25 groups using clusters of orthologous genes analysis. After exposing the T. kingsejongensis to 12 kJ/m2 UVB radiation, 77 biological processes were modulated over different time periods (0, 6, 12, 24, and 48 h) compared with the control. A Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that UVB exposure in T. kingsejongensis downregulated ribosome and glyoxylate and dicarboxylate metabolism at all time points. Furthermore, antioxidant and chaperone proteins were highly downregulated in response to UVB exposure, causing protein damage and activating apoptotic processes in the 48 h UVB exposure group. These proteomic changes show the mechanisms that underlie the detrimental effects of UVB on the cellular defense systems of the Antarctic copepod T. kingsejongensis.
- Subjects :
- Proteomics
Ultraviolet Rays
Physiology
Health, Toxicology and Mutagenesis
Antarctic Regions
Glyoxylate and dicarboxylate metabolism
Apoptosis
Biology
Toxicology
Biochemistry
Ribosome
Copepoda
chemistry.chemical_compound
Animals
KEGG
skin and connective tissue diseases
Gene
integumentary system
Proteomic Profiling
Gene Expression Profiling
Cell Biology
General Medicine
biology.organism_classification
Cell biology
Gene Expression Regulation
chemistry
Proteome
Biomarkers
Copepod
Subjects
Details
- ISSN :
- 15320456
- Volume :
- 248
- Database :
- OpenAIRE
- Journal :
- Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology
- Accession number :
- edsair.doi.dedup.....17f727d6e5390a26330917391fd4716a
- Full Text :
- https://doi.org/10.1016/j.cbpc.2021.109120