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iTRAQ-based proteomic profiling, pathway analyses, and apoptotic mechanism in the Antarctic copepod Tigriopus kingsejongensis in response to ultraviolet B radiation

Authors :
Sanghee Kim
Min-Chul Lee
Jun Chul Park
Jeonghoon Han
Duck-Hyun Kim
Young-Hwan Lee
Eunjin Byeon
Joung Han Yim
Min-Sub Kim
Jae-Seong Lee
Source :
Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology. 248:109120
Publication Year :
2021
Publisher :
Elsevier BV, 2021.

Abstract

iTRAQ proteomic profiling was conducted to examine the proteomic responses of the Antarctic copepod Tigriopus kingsejongensis under ultraviolet B (UVB) exposure. Of the 5507 proteins identified, 3479 proteins were annotated and classified into 25 groups using clusters of orthologous genes analysis. After exposing the T. kingsejongensis to 12 kJ/m2 UVB radiation, 77 biological processes were modulated over different time periods (0, 6, 12, 24, and 48 h) compared with the control. A Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that UVB exposure in T. kingsejongensis downregulated ribosome and glyoxylate and dicarboxylate metabolism at all time points. Furthermore, antioxidant and chaperone proteins were highly downregulated in response to UVB exposure, causing protein damage and activating apoptotic processes in the 48 h UVB exposure group. These proteomic changes show the mechanisms that underlie the detrimental effects of UVB on the cellular defense systems of the Antarctic copepod T. kingsejongensis.

Details

ISSN :
15320456
Volume :
248
Database :
OpenAIRE
Journal :
Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology
Accession number :
edsair.doi.dedup.....17f727d6e5390a26330917391fd4716a
Full Text :
https://doi.org/10.1016/j.cbpc.2021.109120