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First confirmation of importation and transmission in Spain of the newly identified SARS-CoV-2 B.1.1.7 variant
- Source :
- Enfermedades Infecciosas Y Microbiologia Clinica
- Publication Year :
- 2021
-
Abstract
- INTRODUCTION: A newly identified SARS-CoV-2 variant, VOC202012/01 originating lineage B.1.1.7, recently emerged in the United Kingdom. The rapid spread in the UK of this new variant has caused other countries to be vigilant. MATERIAL AND METHODS: We based our initial screening of B.1.1.7 on the dropout of the S gene signal in the TaqPath assay, caused by the 69/70 deletion. Subsequently, we confirmed the B.1.1.7 candidates by whole genome sequencing. RESULTS: We describe the first three imported cases of this variant from London to Madrid, subsequent post-arrival household transmission to three relatives, and the two first cases without epidemiological links to UK. One case required hospitalization. In all cases, drop-out of gene S was correctly associated to the B.1.1.7 variant, as all the corresponding sequences carried the 17 lineage-marker mutations. CONCLUSION: The first identifications of the SARS-CoV-2 B.1.1.7 variant in Spain indicate the role of independent introductions from the UK coexisting with post-arrival transmission in the community, since the early steps of this new variant in our country.
- Subjects :
- 0301 basic medicine
Microbiology (medical)
2019-20 coronavirus outbreak
Lineage (genetic)
Coronavirus disease 2019 (COVID-19)
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
030106 microbiology
B.1.1.7, Importación
Biology
law.invention
03 medical and health sciences
0302 clinical medicine
law
Transmission
Humans
030212 general & internal medicine
B.1.1.7
Gene
Whole genome sequencing
Genetics
Transmisión
SARS-CoV-2
COVID-19
New variant
Importation
Hospitalization
Transmission (mechanics)
Spain
Original Article
WGS
Subjects
Details
- ISSN :
- 2529993X
- Database :
- OpenAIRE
- Journal :
- Enfermedades infecciosas y microbiologia clinica (English ed.)
- Accession number :
- edsair.doi.dedup.....16087b96777e21d01b9b4a30d8aa54b8