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Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam

Authors :
Anne Meyer
Pawin Padungtod
Katriina Willgert
Nhu Van Thu
Dinh Xuan Tung
Guillaume Fournié
Nguyen Thanh Thuy
Dirk U. Pfeiffer
Pham Thanh Long
Timothée Vergne
Scott H. Newman
Royal Veterinary College [London]
University of London [London]
Department of Pathobiology and Population Sciences
Royal Veterinary College
Veterinary Epidemiology, Economics and Public Health Group
University of Cambridge [UK] (CAM)
Department of Veterinary Medicine, Disease Dynamics Unit [UK]
Ausvet Europe
Institute of Environmental Health and Sustainable Development (IEHSD)
Food and Agriculture Organization of the United Nations, Global Emergency Centre for Transboundary Animal Diseases (ECTAD)
Ministry of Agriculture and Rural Development [Hanoï] (MARD)
City University of Hong Kong [Hong Kong] (CUHK)
Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC)
Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])
Interactions hôtes-agents pathogènes [Toulouse] (IHAP)
Ecole Nationale Vétérinaire de Toulouse (ENVT)
Institut National Polytechnique (Toulouse) (Toulouse INP)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
This work was supported by a British Council Institutional Links grant under the Newton Fund (Grant ID: 172711836), which is administered through the UK Department for Business Innovation and Skills.
Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP)
Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Willgert, Katriina [0000-0003-3586-1997]
Apollo - University of Cambridge Repository
Source :
Scientific Reports, Vol 10, Iss 1, Pp 1-11 (2020), Scientific Reports, Scientific Reports, Nature Publishing Group, 2020, 10, pp.8432. ⟨10.1038/s41598-020-65413-2⟩, Scientific Reports, 2020, 10, pp.8432. ⟨10.1038/s41598-020-65413-2⟩
Publication Year :
2020
Publisher :
Nature Publishing Group, 2020.

Abstract

The presence of free-grazing ducks (FGD) has consistently been shown to be associated with highly pathogenic avian influenza virus (HPAIV) H5N1 outbreaks in South-East Asia. However, the lack of knowledge about the transmission pathways limits the effectiveness of control efforts. To address this gap, we developed a probabilistic transmission model of HPAIV H5N1 in the nomadic FGD production system in Viet Nam, assuming different scenarios to address parameter uncertainty. Results suggested that HPAIV H5N1 could spread within the nomadic FGD production system, with an estimated flock-level effective reproduction number (re) ranging from 2.16 (95% confidence interval (CI): 1.39-3.49) to 6.10 (95%CI: 3.93-9.85) depending on the scenario. Indirect transmission via boats and trucks was shown to be the main transmission route in all scenarios. Results suggest that re could be reduced below one with 95% confidence if 86% of FGD flocks were vaccinated in the best-case scenario or 95% in the worst-case scenario. If vaccination was combined with cleaning and disinfection of transport vehicles twice a week, vaccination coverage could be lowered to 60% in the best-case scenario. These findings are of particular relevance for prioritising interventions for effective control of HPAIV in nomadic free-grazing duck production systems.

Details

Language :
English
ISSN :
20452322
Volume :
10
Issue :
1
Database :
OpenAIRE
Journal :
Scientific Reports
Accession number :
edsair.doi.dedup.....154f8f1ef6b571a6c6a8141e522d2d42