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DELLA family duplication events lead to different selective constraints in angiosperms
- Source :
- Genetica, Genetica, Springer Verlag, 2020, 148 (5-6), pp.243-251. ⟨10.1007/s10709-020-00102-6⟩, Genetica, 2020, 148 (5-6), pp.243-251. ⟨10.1007/s10709-020-00102-6⟩
- Publication Year :
- 2020
- Publisher :
- Springer Science and Business Media LLC, 2020.
-
Abstract
- International audience; Gibberellic acid (GA) is a major plant hormone involved in several biological processes from the flowering to the symbiosis with microorganisms. Thus, the GA regulation is crucial for plant biology. This regulation occurs via the DELLA proteins that belong to the GRAS transcription factor family. DELLA proteins are characterised by a DELLA N-terminal and a GRAS C-terminal domains. It is well known that DELLA activity appears after the bryophytes divergence and then evolved in the vascular plant lineages. Here we present the phylogeny of DELLA across 75 species belonging to various lineages from algae, liverworts and angiosperms. Our study confirmed two main duplication events, the first occurring before the angiosperms divergence and the other specific to the eudicots lineage. Comparative analysis of DELLA subclades in angiosperms revealed the loss in Poaceae and strong alteration in other species of the DELLA functional domain in the DELLA2 clade. In addition, molecular evolution analysis suggests that each of the clades (named DELLA1.1, DELLA1.2 and DELLA2) evolved differently but copies of each subclade are under strong purifying selection. This also suggests that, although the DELLA functional domain is altered in DELLA2, DELLA2 orthologs are still functional and operate in a different way compared to DELLA1 copies. In angiosperms, additional duplication events occurred and led to duplicate copies in species, genus or family such as in the Fabaceae subfamily Papilionoideae. This duplication led to the formation of additional paralogs in the DELLA1.2 subclade (DELLA1.2.1 and DELLA1.2.2). Interestingly, both copies appeared to be under relaxing selection revealing different evolutionary fate of the DELLA duplicated copies.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Subfamily
Lineage (evolution)
MESH: Selection, Genetic
Plant Science
MESH: Gibberellins / metabolism
Biology
010603 evolutionary biology
01 natural sciences
Evolution, Molecular
Evolutionary history
Magnoliopsida
03 medical and health sciences
Phylogenetics
Molecular evolution
MESH: Transcription Factors / genetics
Gene Duplication
MESH: Evolution, Molecular
Gene duplication
Genetics
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology
Selection, Genetic
MESH: Phylogeny
Eudicots
Clade
MESH: Magnoliopsida / genetics
Phylogeny
MESH: Gene Duplication
Plant Proteins
MESH: Magnoliopsida / classification
Fabaceae
Subclade
General Medicine
[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics
Gibberellins
MESH: Plant Proteins / genetics
030104 developmental biology
Evolutionary biology
Multigene Family
Insect Science
MESH: Multigene Family
Animal Science and Zoology
DELLA
Transcription Factors
Subjects
Details
- ISSN :
- 15736857 and 00166707
- Volume :
- 148
- Database :
- OpenAIRE
- Journal :
- Genetica
- Accession number :
- edsair.doi.dedup.....143b867374f32d78d652039ccc15e527