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Her2 Challenge Contest: A Detailed Assessment of Automated Her2 Scoring Algorithms in Whole Slide Images of Breast Cancer Tissues

Her2 Challenge Contest: A Detailed Assessment of Automated Her2 Scoring Algorithms in Whole Slide Images of Breast Cancer Tissues

Authors :
Abhik Mukherjee
Matt Baillie Smith
Marcel Simon
Joachim Denzler
Vamsi Tallam
Chao-Hui Huang
Sai Dileep Munugoti
David Snead
Ian O. Ellis
Ramakrishnan Mukundan
Nasir M. Rajpoot
Chaitanya Reddy Pb
Abhir Bhalerao
Anibal Pedraza
Tomi Pitkäaho
Thomas J. Naughton
Gloria Bueno
Mohammad Ilyas
Matt Berseth
Talha Qaiser
Taina M. Lehtimäki
Erik Rodner
Publication Year :
2017

Abstract

Evaluating expression of the Human epidermal growth factor receptor 2 (Her2) by visual examination of immunohistochemistry (IHC) on invasive breast cancer (BCa) is a key part of the diagnostic assessment of BCa due to its recognised importance as a predictive and prognostic marker in clinical practice. However, visual scoring of Her2 is subjective and consequently prone to inter-observer variability. Given the prognostic and therapeutic implications of Her2 scoring, a more objective method is required. In this paper, we report on a recent automated Her2 scoring contest, held in conjunction with the annual PathSoc meeting held in Nottingham in June 2016, aimed at systematically comparing and advancing the state-of-the-art Artificial Intelligence (AI) based automated methods for Her2 scoring. The contest dataset comprised of digitised whole slide images (WSI) of sections from 86 cases of invasive breast carcinoma stained with both Haematoxylin & Eosin (H&E) and IHC for Her2. The contesting algorithms automatically predicted scores of the IHC slides for an unseen subset of the dataset and the predicted scores were compared with the 'ground truth' (a consensus score from at least two experts). We also report on a simple Man vs Machine contest for the scoring of Her2 and show that the automated methods could beat the pathology experts on this contest dataset. This paper presents a benchmark for comparing the performance of automated algorithms for scoring of Her2. It also demonstrates the enormous potential of automated algorithms in assisting the pathologist with objective IHC scoring. \ud \ud Her2 Challenge Contest: A Detailed Assessment of Automated Her2 Scoring Algorithms in Whole Slide Images of Breast Cancer Tissues. Available from: https://www.researchgate.net/publication/317087832_Her2_Challenge_Contest_A_Detailed_Assessment_of_Automated_Her2_Scoring_Algorithms_in_Whole_Slide_Images_of_Breast_Cancer_Tissues [accessed Jul 31, 2017].

Details

Language :
English
ISSN :
03090167
Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....11f722b3984ae5f3205956e29aab23d5