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Gen2EpiGUI: User-Friendly Pipeline for Analyzing Whole-Genome Sequencing Data for Epidemiological Studies of Neisseria gonorrhoeae

Authors :
Reema Singh
Trevor Yarmovich
Jo-Anne R. Dillon
Anthony Kusalik
Source :
Sexually Transmitted Diseases. 47:e42-e44
Publication Year :
2020
Publisher :
Ovid Technologies (Wolters Kluwer Health), 2020.

Abstract

We have developed a graphical user interface for our Gen2Epi computational pipeline named Gen2EpiGUI. A total of 594 published whole-genome sequence datasets of Neisseria gonorrhoeae were used to validate the program. Gen2Epi facilitates an understandable analysis of N. gonorrhoeae whole-genome sequence data for users with limited bioinformatics skills.

Details

ISSN :
15374521 and 01485717
Volume :
47
Database :
OpenAIRE
Journal :
Sexually Transmitted Diseases
Accession number :
edsair.doi.dedup.....11befa3025effd7db71699a603455410
Full Text :
https://doi.org/10.1097/olq.0000000000001206