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Gen2EpiGUI: User-Friendly Pipeline for Analyzing Whole-Genome Sequencing Data for Epidemiological Studies of Neisseria gonorrhoeae
- Source :
- Sexually Transmitted Diseases. 47:e42-e44
- Publication Year :
- 2020
- Publisher :
- Ovid Technologies (Wolters Kluwer Health), 2020.
-
Abstract
- We have developed a graphical user interface for our Gen2Epi computational pipeline named Gen2EpiGUI. A total of 594 published whole-genome sequence datasets of Neisseria gonorrhoeae were used to validate the program. Gen2Epi facilitates an understandable analysis of N. gonorrhoeae whole-genome sequence data for users with limited bioinformatics skills.
- Subjects :
- Microbiology (medical)
education
Dermatology
Computational biology
medicine.disease_cause
03 medical and health sciences
0302 clinical medicine
Data sequences
medicine
Humans
030212 general & internal medicine
Graphical user interface
Whole genome sequencing
User Friendly
030505 public health
Whole Genome Sequencing
business.industry
Public Health, Environmental and Occupational Health
Computational Biology
Pipeline (software)
Neisseria gonorrhoeae
Epidemiologic Studies
ComputingMethodologies_PATTERNRECOGNITION
Infectious Diseases
0305 other medical science
business
Subjects
Details
- ISSN :
- 15374521 and 01485717
- Volume :
- 47
- Database :
- OpenAIRE
- Journal :
- Sexually Transmitted Diseases
- Accession number :
- edsair.doi.dedup.....11befa3025effd7db71699a603455410
- Full Text :
- https://doi.org/10.1097/olq.0000000000001206