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Solution NMR Structure of Proteorhodopsin
- Publication Year :
- 2011
-
Abstract
- and we show herein the de novo structure ofthegreenvariantofproteorhodopsinsolvedbysolutionNMRspectroscopy.The structure of PR (Figure 1) was solved in the short-chain lipid diC7PC (diheptanoyl-phosphocholine) combininglong-range NOEs with restraints derived from paramagneticrelaxation enhancement (PRE) and residual dipolar cou-plings (RDCs). The seven transmembrane helices are con-nected by short loops. Instead of the anti-parallel b-sheet thatis observed between helices B and C in other microbialrhodopsins, torsion angles derived from the protein backbonedihedral angle prediction program TALOS+ suggest that PRresidues G87–P90 form a short b-turn. The loop betweenhelices D and E is longer than predicted by the secondarystructure prediction program TMHMM.
- Subjects :
- Models, Molecular
Rhodopsin
Proteorhodopsin
biology
Chemistry
General Medicine
General Chemistry
Nuclear magnetic resonance spectroscopy
biology.organism_classification
Catalysis
Article
Protein Structure, Secondary
Protein Structure, Tertiary
Solutions
Crystallography
Transmembrane domain
Protein structure
Structural biology
Proton transport
Talos
Rhodopsins, Microbial
biology.protein
Nuclear Magnetic Resonance, Biomolecular
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....10aa8c122b48276c214e4a11eaf14911