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Complete Genome Sequence Analysis of a Newcastle Disease Virus Isolated from a Wild Egret

Authors :
Xie, Zhixun
Xie, Liji
Chen, Anli
Liu, Jiabo
Pang, Yaoshan
Deng, Xianwen
Xie, Zhiqin
Fan, Qing
Source :
Journal of Virology. 86:13854-13855
Publication Year :
2012
Publisher :
American Society for Microbiology, 2012.

Abstract

We report here the complete genomic sequence of a novel Newcastle disease virus (NDV) strain, egret/China/Guangxi/2011, isolated from an egret in Guangxi Province, southern China. A phylogenetic analysis based on a fusion gene comparison with different NDV strains revealed that egret/China/Guangxi/2011 was phylogenetically close to genotype VIIa NDV, and the deduced amino acid sequence was 112 R-R-R-K-R-F 117 at the fusion protein cleavage site. The whole nucleotide sequence had the highest homology (93.3%) with the sequence of strain chicken/Sukorejo/019/10 (GenBank accession number HQ697255 ). This study will help us to understand the epidemiology and molecular characteristics of Newcastle disease virus in a migratory egret.

Details

ISSN :
10985514 and 0022538X
Volume :
86
Database :
OpenAIRE
Journal :
Journal of Virology
Accession number :
edsair.doi.dedup.....0c9ca429e812e76ffd9e18e95254b454
Full Text :
https://doi.org/10.1128/jvi.02669-12