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Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media
- Source :
- Scientific data, vol 6, iss 1, Rajput, A, Poudel, S, Tsunemoto, H, Meehan, M, Szubin, R, Olson, C A, Lamsa, A, Seif, Y, Dillon, N, Vrbanac, A, Sugie, J, Dahesh, S, Monk, J M, Dorrestein, P C, Knight, R, Nizet, V, Palsson, B O & Feist, A M 2019, ' Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media ', Scientific Data, vol. 6, no. 1, 322 . https://doi.org/10.1038/s41597-019-0331-z, Scientific Data, Scientific Data, Vol 6, Iss 1, Pp 1-6 (2019)
- Publication Year :
- 2019
- Publisher :
- eScholarship, University of California, 2019.
-
Abstract
- Staphylococcus aureus strains have been continuously evolving resistance to numerous classes of antibiotics including methicillin, vancomycin, daptomycin and linezolid, compounding the enormous healthcare and economic burden of the pathogen. Cation-adjusted Mueller-Hinton broth (CA-MHB) is the standard bacteriological media for measuring antibiotic susceptibility in the clinical lab, but the use of media that more closely mimic the physiological state of the patient, e.g. mammalian tissue culture media, can in certain circumstances reveal antibiotic activities that may be more predictive of effectiveness in vivo. In the current study, we use both types of media to explore antibiotic resistance phenomena in hospital-acquired USA100 lineage methicillin-resistant, vancomycin-intermediate Staphylococcus aureus (MRSA/VISA) strain D712 via multidimensional high throughput analysis of growth rates, bacterial cytological profiling, RNA sequencing, and exo-metabolomics (HPLC and LC-MS). Here, we share data generated from these assays to shed light on the antibiotic resistance behavior of MRSA/VISA D712 in both bacteriological and physiological media.<br />Measurement(s)Antibacterial Response • cDNA • transcription profiling assay • culture medium • organic acidTechnology Type(s)bacterial cytological profiling • RNA sequencing • liquid chromatography-tandem mass spectrometry • high-performance liquid chromatographyFactor Type(s)growth mediumSample Characteristic - OrganismStaphylococcus aureus Machine-accessible metadata file describing the reported data: 10.6084/m9.figshare.10283108
- Subjects :
- Data Descriptor
Antibiotics
Drug Resistance
Drug resistance
Antimicrobial resistance
medicine.disease_cause
chemistry.chemical_compound
Drug Resistance, Multiple, Bacterial
lcsh:Science
0303 health sciences
Bacterial
3. Good health
Computer Science Applications
Infectious Diseases
Staphylococcus aureus
Vancomycin
Statistics, Probability and Uncertainty
Infection
Sequence Analysis
Multiple
medicine.drug
Information Systems
Statistics and Probability
Methicillin-Resistant Staphylococcus aureus
medicine.drug_class
Biology
Library and Information Sciences
Microbiology
Education
Nafcillin
03 medical and health sciences
Antibiotic resistance
medicine
Metabolomics
Clinical microbiology
030304 developmental biology
Sequence Analysis, RNA
030306 microbiology
Prevention
Bacteriology
biochemical phenomena, metabolism, and nutrition
Culture Media
High-Throughput Screening Assays
Emerging Infectious Diseases
chemistry
Linezolid
RNA
lcsh:Q
Antimicrobial Resistance
Daptomycin
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Scientific data, vol 6, iss 1, Rajput, A, Poudel, S, Tsunemoto, H, Meehan, M, Szubin, R, Olson, C A, Lamsa, A, Seif, Y, Dillon, N, Vrbanac, A, Sugie, J, Dahesh, S, Monk, J M, Dorrestein, P C, Knight, R, Nizet, V, Palsson, B O & Feist, A M 2019, ' Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media ', Scientific Data, vol. 6, no. 1, 322 . https://doi.org/10.1038/s41597-019-0331-z, Scientific Data, Scientific Data, Vol 6, Iss 1, Pp 1-6 (2019)
- Accession number :
- edsair.doi.dedup.....0bb0ffa7ce7e49251957a1a30c0faf5f