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An Open Resource for Non-human Primate Imaging
- Source :
- Neuron, Neuron, 2018, 100 (1), pp.61-74.e2. ⟨10.1016/j.neuron.2018.08.039⟩, Neuron, 100, 61-74.e2. Cell Press, Neuron, vol 100, iss 1, Neuron, Elsevier, 2018, 100 (1), pp.61-74.e2. ⟨10.1016/j.neuron.2018.08.039⟩, Neuron, 100(1), 61-74.e2. Cell Press, Neuron, 100, 61-74.e2, Neuron, 100, 1, pp. 61-74.e2, Milham, M P, Ai, L, Koo, B, Xu, T, Amiez, C, Balezeau, F, Baxter, M G, Blezer, E L A, Brochier, T, Chen, A, Croxson, P L, Damatac, C G, Dehaene, S, Everling, S, Fair, D A, Fleysher, L, Freiwald, W, Froudist-Walsh, S, Griffiths, T D, Guedj, C, Hadj-Bouziane, F, Ben Hamed, S, Harel, N, Hiba, B, Jarraya, B, Jung, B, Kastner, S, Klink, P C, Kwok, S C, Laland, K N, Leopold, D A, Lindenfors, P, Mars, R B, Menon, R S, Messinger, A, Meunier, M, Mok, K, Morrison, J H, Nacef, J, Nagy, J, Rios, M O, Petkov, C I, Pinsk, M, Poirier, C, Procyk, E, Rajimehr, R, Reader, S M, Roelfsema, P R, Rudko, D A, Rushworth, M F S, Russ, B E, Sallet, J, Schmid, M C, Schwiedrzik, C M, Seidlitz, J, Sein, J, Shmuel, A, Sullivan, E L, Ungerleider, L, Thiele, A, Todorov, O S, Tsao, D, Wang, Z, Wilson, C R E, Yacoub, E, Ye, F Q, Zarco, W, Zhou, Y D, Margulies, D S & Schroeder, C E 2018, ' An Open Resource for Non-human Primate Imaging ', Neuron, vol. 100, no. 1, pp. 61-74 . https://doi.org/10.1016/j.neuron.2018.08.039, Neuron, 100(1), 61-74. Cell Press, Brain and Mind Institute Researchers' Publications, Neuron, 100(1), 61. Cell Press
- Publication Year :
- 2018
- Publisher :
- HAL CCSD, 2018.
-
Abstract
- Summary Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.<br />Highlights • Openly shared, large non-human primate neuroimaging data resource • Multiple imaging modalities contributed from investigators around the world • Quality assessments of the dataset • Discussed pitfalls and challenges in analyzing the non-human primate MRI data<br />The PRIMatE Data Exchange (PRIME-DE) consortium is an open science resource for the neuroimaging community aiming to facilitate efforts to map the non-human primate connectome. It aggregates and shares anatomical, functional, and diffusion MRI datasets from laboratories throughout the world.
- Subjects :
- 0301 basic medicine
Primates
Computer science
Neuroscience(all)
[SDV]Life Sciences [q-bio]
QH301 Biology
Datasets as Topic
Neuroimaging
Article
03 medical and health sciences
QH301
0302 clinical medicine
Resource (project management)
All institutes and research themes of the Radboud University Medical Center
SDG 17 - Partnerships for the Goals
Connectome
Animals
Psychology
[SDV.NEU] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]
Independent data
Biological sciences
ComputingMilieux_MISCELLANEOUS
Non human primate
Neurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7]
Neurology & Neurosurgery
Quality assessment
Action, intention, and motor control
Information Dissemination
General Neuroscience
Neurosciences
Perception, Action and Control [DI-BCB_DCC_Theme 2]
Brain
DAS
Data science
Magnetic Resonance Imaging
030104 developmental biology
Data exchange
Biomedical Imaging
Cognitive Sciences
[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]
030217 neurology & neurosurgery
Subjects
Details
- Language :
- English
- ISSN :
- 08966273 and 10974199
- Database :
- OpenAIRE
- Journal :
- Neuron, Neuron, 2018, 100 (1), pp.61-74.e2. ⟨10.1016/j.neuron.2018.08.039⟩, Neuron, 100, 61-74.e2. Cell Press, Neuron, vol 100, iss 1, Neuron, Elsevier, 2018, 100 (1), pp.61-74.e2. ⟨10.1016/j.neuron.2018.08.039⟩, Neuron, 100(1), 61-74.e2. Cell Press, Neuron, 100, 61-74.e2, Neuron, 100, 1, pp. 61-74.e2, Milham, M P, Ai, L, Koo, B, Xu, T, Amiez, C, Balezeau, F, Baxter, M G, Blezer, E L A, Brochier, T, Chen, A, Croxson, P L, Damatac, C G, Dehaene, S, Everling, S, Fair, D A, Fleysher, L, Freiwald, W, Froudist-Walsh, S, Griffiths, T D, Guedj, C, Hadj-Bouziane, F, Ben Hamed, S, Harel, N, Hiba, B, Jarraya, B, Jung, B, Kastner, S, Klink, P C, Kwok, S C, Laland, K N, Leopold, D A, Lindenfors, P, Mars, R B, Menon, R S, Messinger, A, Meunier, M, Mok, K, Morrison, J H, Nacef, J, Nagy, J, Rios, M O, Petkov, C I, Pinsk, M, Poirier, C, Procyk, E, Rajimehr, R, Reader, S M, Roelfsema, P R, Rudko, D A, Rushworth, M F S, Russ, B E, Sallet, J, Schmid, M C, Schwiedrzik, C M, Seidlitz, J, Sein, J, Shmuel, A, Sullivan, E L, Ungerleider, L, Thiele, A, Todorov, O S, Tsao, D, Wang, Z, Wilson, C R E, Yacoub, E, Ye, F Q, Zarco, W, Zhou, Y D, Margulies, D S & Schroeder, C E 2018, ' An Open Resource for Non-human Primate Imaging ', Neuron, vol. 100, no. 1, pp. 61-74 . https://doi.org/10.1016/j.neuron.2018.08.039, Neuron, 100(1), 61-74. Cell Press, Brain and Mind Institute Researchers' Publications, Neuron, 100(1), 61. Cell Press
- Accession number :
- edsair.doi.dedup.....0af0245adf676daa3ff28044472bc6e0
- Full Text :
- https://doi.org/10.1016/j.neuron.2018.08.039⟩