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Characterizing the phylogenetic tree community structure of a protected tropical rain forest area in Cameroon

Authors :
Olivier J. Hardy
Stéphanie Manel
François Munoz
Pierre Couteron
Thomas L. P. Couvreur
Bonaventure Sonké
Botanique et Modélisation de l'Architecture des Plantes et des Végétations (UMR AMAP)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])
Laboratoire Population-Environnement-Développement (LPED)
Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)
Diversité, adaptation, développement des plantes (UMR DIADE)
Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)
Evolution Biologique et Ecologie
Université de Bruxelles
Department of Biology, Higher Teachers Training College (HTTC)
Université deYaoundé I
Université de Yaoundé I [Yaoundé]
Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut National de la Recherche Agronomique (INRA)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])
Université de Yaoundé I
Source :
PLoS ONE, PLoS ONE, Public Library of Science, 2014, 9, pp.e98920, PLoS ONE, Public Library of Science, 2014, 9, pp.e98920. ⟨10.1371/journal.pone.0098920⟩, PLoS ONE, 2014, 9, pp.e98920. ⟨10.1371/journal.pone.0098920⟩, PloS one, PLoS ONE, Vol 9, Iss 6, p e98920 (2014)
Publication Year :
2014
Publisher :
HAL CCSD, 2014.

Abstract

Tropical rain forests, the richest terrestrial ecosystems in biodiversity on Earth are highly threatened by global changes. This paper aims to infer the mechanisms governing species tree assemblages by characterizing the phylogenetic structure of a tropical rain forest in a protected area of the Congo Basin, the Dja Faunal Reserve (Cameroon). We re-analyzed a dataset of 11538 individuals belonging to 372 taxa found along nine transects spanning five habitat types. We generated a dated phylogenetic tree including all sampled taxa to partition the phylogenetic diversity of the nine transects into alpha and beta components at the level of the transects and of the habitat types. The variation in phylogenetic composition among transects did not deviate from a random pattern at the scale of the Dja Faunal Reserve, probably due to a common history and weak environmental variation across the park. This lack of phylogenetic structure combined with an isolation-bydistance pattern of taxonomic diversity suggests that neutral dispersal limitation is a major driver of community assembly in the Dja. To assess any lack of sensitivity to the variation in habitat types, we restricted the analyses of transects to the terra firme primary forest and found results consistent with those of the whole dataset at the level of the transects. Additionally to previous analyses, we detected a weak but significant phylogenetic turnover among habitat types, suggesting that species sort in varying environments, even though it is not predominating on the overall phylogenetic structure. Finer analyses of clades indicated a signal of clustering for species from the Annonaceae family, while species from the Apocynaceae family indicated overdispersion. These results can contribute to the conservation of the park by improving our understanding of the processes dictating community assembly in these hyperdiverse but threatened regions of the world. © 2014 Manel et al.<br />SCOPUS: ar.j<br />info:eu-repo/semantics/published

Details

Language :
English
ISSN :
19326203
Database :
OpenAIRE
Journal :
PLoS ONE, PLoS ONE, Public Library of Science, 2014, 9, pp.e98920, PLoS ONE, Public Library of Science, 2014, 9, pp.e98920. ⟨10.1371/journal.pone.0098920⟩, PLoS ONE, 2014, 9, pp.e98920. ⟨10.1371/journal.pone.0098920⟩, PloS one, PLoS ONE, Vol 9, Iss 6, p e98920 (2014)
Accession number :
edsair.doi.dedup.....0a985ff74223bf5710ec6645a3de8172