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Dermabacter jinjuensis sp. nov., a novel species of the genus Dermabacter isolated from a clinical specimen
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 66:2573-2577
- Publication Year :
- 2016
- Publisher :
- Microbiology Society, 2016.
-
Abstract
- A Gram-stain-positive, catalase-positive, facultatively anaerobic, non-motile, coryneform bacterium, designated strain 32T, was isolated from a closed pus sample from a patient having finger necrosis in Korea. Strain 32T was considered as representing a novel species according to its initial identification by matrix-assisted laser desorption/ionization-time-of-flight MS. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 32T belonged to the genus Dermabacter and was closely related to Dermabacter hominis DSM 7083T (=ATCC 49369T) (98.34 % similarity). Optimal growth was observed at 30-40 °C and pH 7. Growth occurred in the presence of 0-6 % (w/v) NaCl. Menaquinones MK-8, MK-7 and MK-9 were the major respiratory quinones. The major polar lipids were phosphatidylethanolamine, phosphatidylcholine, glycolipid and two unknown lipids. The major cellular fatty acids were anteiso-C17 : 0, anteiso-C15 : 0, iso-C16 : 0 and iso-C15 : 0. The DNA G+C content of strain 32T was 62.58 mol%, and the mean level of DNA-DNA relatedness between strain 32T and D. hominis ATCC 49369T was 49±1.6 %. Based on the phenotypic and genotypic characteristics, strain 32T is confirmed to represent a novel species of the genus Dermabacter, for which the name Dermabacter jinjuensis sp. nov. is proposed. The type strain is 32T (=NCCP 16133T=DSM 101003T).
- Subjects :
- DNA, Bacterial
0301 basic medicine
Dermabacter
030106 microbiology
Dermabacter hominis
Microbiology
Fingers
Necrosis
03 medical and health sciences
Glycolipid
Phylogenetics
RNA, Ribosomal, 16S
Actinomycetales
Republic of Korea
Humans
Phospholipids
Phylogeny
Ecology, Evolution, Behavior and Systematics
Base Composition
Suppuration
Phylogenetic tree
biology
Strain (chemistry)
Fatty Acids
Nucleic Acid Hybridization
Vitamin K 2
Sequence Analysis, DNA
General Medicine
biology.organism_classification
16S ribosomal RNA
Bacterial Typing Techniques
030104 developmental biology
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 66
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....0a60489db39cbe935ed3a6c7bab89a20
- Full Text :
- https://doi.org/10.1099/ijsem.0.001092