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Optogenetic tuning reveals rho amplification-dependent dynamics of a cell contraction signal network
- Source :
- Cell Reports, Cell Reports, Vol 33, Iss 9, Pp 108467-(2020)
- Publication Year :
- 2020
- Publisher :
- Cell Press, 2020.
-
Abstract
- Summary Local cell contraction pulses play important roles in tissue and cell morphogenesis. Here, we improve a chemo-optogenetic approach and apply it to investigate the signal network that generates these pulses. We use these measurements to derive and parameterize a system of ordinary differential equations describing temporal signal network dynamics. Bifurcation analysis and numerical simulations predict a strong dependence of oscillatory system dynamics on the concentration of GEF-H1, an Lbc-type RhoGEF, which mediates the positive feedback amplification of Rho activity. This prediction is confirmed experimentally via optogenetic tuning of the effective GEF-H1 concentration in individual living cells. Numerical simulations show that pulse amplitude is most sensitive to external inputs into the myosin component at low GEF-H1 concentrations and that the spatial pulse width is dependent on GEF-H1 diffusion. Our study offers a theoretical framework to explain the emergence of local cell contraction pulses and their modulation by biochemical and mechanical signals.<br />Graphical Abstract<br />Highlights • Cell contraction dynamics are investigated via acute chemo-optogenetic perturbations • A theoretical model predicts GEF-H1-dependent switches in pulsatile Rho dynamics • Experimental manipulations of cytosolic GEF-H1 levels confirm model predictions • Local pulsatile dynamics are generated by coupling feedback regulation and diffusion<br />Kamps et al. derive a reaction-diffusion system that generates subcellular activity pulses of the cell contraction regulator Rho. System parameters are obtained by combining perturbation-response analyses with theoretical investigations. Multiple switches in activity dynamics, which are dependent on the positive feedback mediator GEF-H1, are predicted by theory and confirmed experimentally.
- Subjects :
- 0301 basic medicine
rho GTP-Binding Proteins
Cellbiologi
myosin
cell contraction
Optogenetics
reaction-diffusion system
Signal
General Biochemistry, Genetics and Molecular Biology
Article
dynamical system
Quantitative Biology::Cell Behavior
03 medical and health sciences
0302 clinical medicine
Animals
Humans
parameter inference
lcsh:QH301-705.5
QH581.2
Positive feedback
mechanotransduction
Physics
Cell morphogenesis
cytoskeleton
Cell Biology
Network dynamics
030104 developmental biology
lcsh:Biology (General)
Modulation
Pulse-amplitude modulation
rho GTPase
oscillations
Biological system
Biologie
030217 neurology & neurosurgery
Pulse-width modulation
Signal Transduction
Subjects
Details
- Language :
- English
- ISSN :
- 22111247
- Database :
- OpenAIRE
- Journal :
- Cell Reports, Cell Reports, Vol 33, Iss 9, Pp 108467-(2020)
- Accession number :
- edsair.doi.dedup.....06c54d2ac0339c01d466604db52df422