Back to Search Start Over

What can spike train distances tell us about the neural code?

Authors :
Daniel Chicharro
Thomas Kreuz
Ralph G. Andrzejak
Universitat Pompeu Fabra
Source :
Recercat. Dipósit de la Recerca de Catalunya, instname, Journal of neuroscience methods 199 (2011): 146–165. doi:10.1016/j.jneumeth.2011.05.002, info:cnr-pdr/source/autori:Chicharro D. (a,b); Kreuz T. (b,c); Andrzejak RG (a)/titolo:What can spike train distances tell us about the neural code?/doi:10.1016%2Fj.jneumeth.2011.05.002/rivista:Journal of neuroscience methods/anno:2011/pagina_da:146/pagina_a:165/intervallo_pagine:146–165/volume:199
Publication Year :
2011
Publisher :
Elsevier BV, 2011.

Abstract

Time scale parametric spike train distances like the Victor and the van Rossum distances/nare often applied to study the neural code based on neural stimuli discrimination./nDifferent neural coding hypotheses, such as rate or coincidence coding,/ncan be assessed by combining a time scale parametric spike train distance with a/nclassifier in order to obtain the optimal discrimination performance. The time scale/nfor which the responses to different stimuli are distinguished best is assumed to be/nthe discriminative precision of the neural code. The relevance of temporal coding/nis evaluated by comparing the optimal discrimination performance with the one/nachieved when assuming a rate code./nWe here characterize the measures quantifying the discrimination performance,/nthe discriminative precision, and the relevance of temporal coding. Furthermore,/nwe evaluate the information these quantities provide about the neural code. We/nshow that the discriminative precision is too unspecific to be interpreted in terms/nof the time scales relevant for encoding. Accordingly, the time scale parametric/nnature of the distances is mainly an advantage because it allows maximizing the/ndiscrimination performance across a whole set of measures with different sensitivities/ndetermined by the time scale parameter, but not due to the possibility to/nexamine the temporal properties of the neural code. DC is supported by the grant 2010FI-B2 00079 of the ”Comissionat per a Universitats/ni Recerca del Departament d’Innovació, Universitats i Empresa de la Generalitat/nde Catalunya i del Fons Social Europeu” and grant 2008BE1 00166 of the ”Comissionat per a Universitats i Recerca del Departament d’Innovació, Universitats i Empresa de la Generalitat de Catalunya”. RGA acknowledges grant BFU2007-61710 of the Spanish Ministry of Education and Science.

Details

ISSN :
01650270
Volume :
199
Database :
OpenAIRE
Journal :
Journal of Neuroscience Methods
Accession number :
edsair.doi.dedup.....069a39b945dfa4a3ef5920268425aea3