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Panel‐based genetic testing for inherited retinal disease screening 176 genes

Authors :
Omar A. Mahroo
Kamron N. Khan
Michel Michaelides
Leo Sheck
Gavin Arno
Nikolas Pontikos
Simona Degli Esposti
Andrew R. Webster
Genevieve A. Wright
Source :
Molecular Genetics & Genomic Medicine, Vol 9, Iss 12, Pp n/a-n/a (2021), Molecular Genetics & Genomic Medicine
Publication Year :
2021
Publisher :
Wiley, 2021.

Abstract

Background This case series reports the performance of a next‐generation sequencing (NGS) panel of 176 retinal genes (NGS 176) in patients with inherited retinal disease (IRD). Methods Subjects are patients who underwent genetic testing between 1 August 2016 and 1 January 2018 at Moorfields Eye Hospital, London, UK. Panel‐based genetic testing was performed unless a specific gene (e.g., RS1) or small group of genes (e.g., ABCA4, PRPH2) were suspected. If a novel variant was identified, a further comment on their predicted pathogenicity and evolutionary conservation was offered and segregation studies performed. The main outcome measure is the likelihood of obtaining a genetic diagnosis using NGS 176. Results 488 patients were included. A molecular diagnosis was obtained for 59.4% of patients. Younger patients were more likely to receive a molecular diagnosis; with 92% of children under the age of 6 years receiving a conclusive result. There was a change in their initially assigned inheritance pattern in 8.4% of patients following genetic testing. Selected IRD diagnoses (e.g., achromatopsia, congenital stationary night blindness) were associated with high diagnostic yields. Conclusion This study confirms that NGS 176 is a useful first‐tier genetic test for most IRD patients. Age and initial clinical diagnosis were strongly associated with diagnostic yield.<br />A retrospective study of 488 patients with inherited retinal dystrophy confirms that NGS 176 is a useful first tier genetic test, achieving a molecular diagnosis in 59.4% of those tested. Age and initial clinical diagnosis were strongly associated with diagnostic yield.

Details

Language :
English
ISSN :
23249269
Volume :
9
Issue :
12
Database :
OpenAIRE
Journal :
Molecular Genetics & Genomic Medicine
Accession number :
edsair.doi.dedup.....05668927b8b6498e8d33d7fd601d0325