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Comparative genomics of type 1 IncC plasmids from China
- Source :
- Future Microbiology. 12:1511-1522
- Publication Year :
- 2017
- Publisher :
- Future Medicine Ltd, 2017.
-
Abstract
- Aim: This study dealt with genomic characterization of type 1 IncC resistance plasmids, capable of spreading across taxonomic borders, from China. Materials & methods: p112298-tetA was sequenced and compared with type 1 IncC reference plasmid pR148 and two available sequenced type 1 IncC plasmids pHS36-NDM and pVAS3-1 from China. Results: These plasmids contained one or more exogenous resistance islands, which included the ARI-A islands, the ARI-B islands, the ISEcp1-blaCMY units and the bla KPC-2 region and were inserted at various sites in the IncC backbone and thus represented three distinct lineages. Conclusion: Complex rearrangement and homologous recombination events have occurred during evolution of p112298-tetA, making it significantly differ modularly from the other three plasmids with respect to both plasmid backbone and exogenous resistance regions.
- Subjects :
- Recombination, Genetic
0301 basic medicine
Microbiology (medical)
Comparative genomics
Genetics
China
Genomic Islands
030106 microbiology
Genomics
Sequence Analysis, DNA
Biology
Microbiology
Evolution, Molecular
03 medical and health sciences
Plasmid
Genes, Bacterial
DNA Transposable Elements
Drug Resistance, Bacterial
Gene Order
Homologous recombination
Plasmids
Subjects
Details
- ISSN :
- 17460921 and 17460913
- Volume :
- 12
- Database :
- OpenAIRE
- Journal :
- Future Microbiology
- Accession number :
- edsair.doi.dedup.....04c96a99cf72293ea18c83bcfbfe5362