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Yield of Rare Variants Detected by Targeted Next-Generation Sequencing in a Cohort of Romanian Index Patients with Hypertrophic Cardiomyopathy

Authors :
Lucian Dorobantu
Radu Vatasescu
Maria Dorobanțu
Maria Greavu
Alexandru Deaconu
Miruna Mihaela Micheu
Stefan Bogdan
Nicoleta-Monica Popa-Fotea
Alexandru Scafa-Udriste
Nicoleta Oprescu
Razvan Ticulescu
Monica Dan
Corneliu Iorgulescu
Oana Gheorghe-Fronea
Source :
Diagnostics, Volume 10, Issue 12, Diagnostics, Vol 10, Iss 1061, p 1061 (2020)
Publication Year :
2020

Abstract

Background: The aim of this study was to explore the rare variants in a cohort of Romanian index cases with hypertrophic cardiomyopathy (HCM). Methods: Forty-five unrelated probands with HCM were screened by targeted next generation sequencing (NGS) of 47 core and emerging genes connected with HCM. Results: We identified 95 variants with allele frequency &lt<br />0.1% in population databases. MYBPC3 and TTN had the largest number of rare variants (17 variants each). A definite genetic etiology was found in 6 probands (13.3%), while inconclusive results due to either known or novel variants were established in 31 cases (68.9%). All disease-causing variants were detected in sarcomeric genes (MYBPC3 and MYH7 with two cases each, and one case in TNNI3 and TPM1 respectively). Multiple variants were detected in 27 subjects (60%), but no proband carried more than one causal variant. Of note, almost half of the rare variants were novel. Conclusions: Herein we reported for the first time the rare variants identified in core and putative genes associated with HCM in a cohort of Romanian unrelated adult patients. The clinical significance of most detected variants is yet to be established, additional studies based on segregation analysis being required for definite classification.

Details

ISSN :
20754418
Volume :
10
Issue :
12
Database :
OpenAIRE
Journal :
Diagnostics (Basel, Switzerland)
Accession number :
edsair.doi.dedup.....0286f8891be5e7dd146587d5b4815b08