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The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 Å resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator

Authors :
Marc C. Deller
Henry Tien
Slawomir K. Grzechnik
Qingping Xu
Scott A. Lesley
Aprilfawn White
Constantina Bakolitsa
Kevin D. Murphy
Ylva Elias
Alex Bateman
Dana Weekes
Adam Godzik
John Wooley
Claire Acosta
Kevin K. Jin
Hsiu-Ju Chiu
Thomas Clayton
Polat Abdubek
Mark W. Knuth
Abhinav Kumar
Debanu Das
Julie Feuerhelm
Lian Duan
Christina V. Trout
Mitchell D. Miller
Sanjay Krishna
Anna Grzechnik
Ron Reyes
Joanna C Grant
Ian A. Wilson
Heath E. Klock
Marc-André Elsliger
Prasad Burra
Christopher L. Rife
Edward Nigoghossian
Andrew T. Morse
Daniel McMullan
Herbert L. Axelrod
Gye Won Han
Silvya Oommachen
Christine B Trame
Natasha Sefcovic
Piotr Kozbial
Keith O. Hodgson
Tamara Astakhova
David Marciano
Ashley M. Deacon
Dennis Carlton
Lukasz Jaroszewski
Jessica Paulsen
Linda Okach
Henry van den Bedem
Source :
Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
Publication Year :
2010
Publisher :
eScholarship, University of California, 2010.

Abstract

The crystal structure of the first representative of the Pfam PF07336 (DUF1470) family reveals a two-domain organization that contains a new fold, termed the ABATE domain, at the N-terminus and a treble-clef zinc finger that is likely to bind DNA at the C-terminus.<br />The crystal structure of Jann_2411 from Jannaschia sp. strain CCS1, a member of the Pfam PF07336 family classified as a domain of unknown function (DUF1470), was solved to a resolution of 1.45 Å by multiple-wavelength anomalous dispersion (MAD). This protein is the first structural representative of the DUF1470 Pfam family. Structural analysis revealed a two-domain organization, with the N-terminal domain presenting a new fold called the ABATE domain that may bind an as yet unknown ligand. The C-terminal domain forms a treble-clef zinc finger that is likely to be involved in DNA binding. Analysis of the Jann_2411 protein and the broader ABATE-domain family suggests a role as stress-induced transcriptional regulators.

Details

Database :
OpenAIRE
Journal :
Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
Accession number :
edsair.doi.dedup.....02241f596168565f796473df251b383d