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The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 Å resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator
- Source :
- Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
- Publication Year :
- 2010
- Publisher :
- eScholarship, University of California, 2010.
-
Abstract
- The crystal structure of the first representative of the Pfam PF07336 (DUF1470) family reveals a two-domain organization that contains a new fold, termed the ABATE domain, at the N-terminus and a treble-clef zinc finger that is likely to bind DNA at the C-terminus.<br />The crystal structure of Jann_2411 from Jannaschia sp. strain CCS1, a member of the Pfam PF07336 family classified as a domain of unknown function (DUF1470), was solved to a resolution of 1.45 Å by multiple-wavelength anomalous dispersion (MAD). This protein is the first structural representative of the DUF1470 Pfam family. Structural analysis revealed a two-domain organization, with the N-terminal domain presenting a new fold called the ABATE domain that may bind an as yet unknown ligand. The C-terminal domain forms a treble-clef zinc finger that is likely to be involved in DNA binding. Analysis of the Jann_2411 protein and the broader ABATE-domain family suggests a role as stress-induced transcriptional regulators.
- Subjects :
- Models, Molecular
Crystallography, X-Ray
Biochemistry
chemistry.chemical_compound
Protein structure
Structural Biology
Models
2.1 Biological and endogenous factors
Rhodobacteraceae
Aetiology
Peptide sequence
domains of unknown function
Genetics
Zinc finger
0303 health sciences
Crystallography
Zinc Fingers
Jannaschia
Biological Sciences
Condensed Matter Physics
environmental stress
New Folds
Pfam
Protein Structure
1.1 Normal biological development and functioning
bound metal identification
030303 biophysics
Molecular Sequence Data
Biophysics
Sequence alignment
Biology
Structural genomics
Quaternary
03 medical and health sciences
Bacterial Proteins
Underpinning research
Amino Acid Sequence
Protein Structure, Quaternary
030304 developmental biology
Molecular
structural genomics
biology.organism_classification
Protein Structure, Tertiary
chemistry
Chemical Sciences
X-Ray
Generic health relevance
Transcription regulator
Sequence Alignment
DNA
Tertiary
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Acta crystallographica. Section F, Structural biology and crystallization communications, vol 66, iss Pt 10, Acta Crystallographica Section F: Structural Biology and Crystallization Communications
- Accession number :
- edsair.doi.dedup.....02241f596168565f796473df251b383d